Factsheet for HORVU6Hr1G022270.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, vacuole
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G022300.1	Barley	extracellular, mitochondrion, plastid, vacuole	24.5	100.0
TraesCS6A01G122100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	87.39	90.36
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	87.02	89.98
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	86.84	89.79
Os02t0151300-01	Rice	endoplasmic reticulum, extracellular, vacuole	76.05	77.9
Zm00001d015292_P001	Maize	endoplasmic reticulum, extracellular, vacuole	73.31	76.24
EES06282	Sorghum	extracellular, vacuole	72.76	74.39
GSMUA_Achr2P05330_001	Banana	vacuole	56.31	64.17
GSMUA_Achr3P28200_001	Banana	endoplasmic reticulum, golgi, vacuole	53.56	63.83
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	59.6	62.57
Solyc07g049300.2.1	Tomato	extracellular, vacuole	57.4	62.43
PGSC0003DMT400001781	Potato	extracellular, vacuole	57.4	62.43
CDY19428	Canola	vacuole	59.05	61.88
AT2G32990.1	Thale cress	extracellular, vacuole	59.23	61.71
CDY17123	Canola	vacuole	58.87	61.69
Bra005536.1-P	Field mustard	vacuole	58.68	61.49
GSMUA_Achr8P25280_001	Banana	endoplasmic reticulum, extracellular, vacuole	53.56	61.04
CDY23776	Canola	vacuole	58.68	61.03
CDY19174	Canola	vacuole	58.5	60.72
KRH73374	Soybean	vacuole	57.59	60.11
KRH14764	Soybean	cytosol, nucleus, vacuole	44.42	59.85
Bra021821.1-P	Field mustard	vacuole	55.39	59.53
HORVU7Hr1G029660.1	Barley	extracellular, mitochondrion, vacuole	55.94	57.52
HORVU7Hr1G029680.1	Barley	peroxisome, vacuole	56.12	56.23
HORVU7Hr1G040680.3	Barley	vacuole	57.4	56.17
HORVU0Hr1G023830.2	Barley	vacuole	56.12	55.22
HORVU5Hr1G060140.1	Barley	vacuole	52.47	49.65
HORVU1Hr1G015550.1	Barley	vacuole	43.88	48.98
HORVU7Hr1G075970.1	Barley	endoplasmic reticulum, extracellular, vacuole	41.86	46.26
HORVU1Hr1G085830.2	Barley	vacuole	51.55	45.19
HORVU5Hr1G052830.1	Barley	endoplasmic reticulum, extracellular	40.59	44.67
HORVU6Hr1G073570.3	Barley	extracellular	40.4	44.47
HORVU3Hr1G029470.2	Barley	endoplasmic reticulum, extracellular, vacuole	50.46	44.3
HORVU7Hr1G041610.1	Barley	vacuole	40.4	44.02
HORVU2Hr1G120100.1	Barley	extracellular	49.18	43.67
HORVU2Hr1G077130.1	Barley	extracellular, vacuole	39.67	43.49
HORVU1Hr1G079980.3	Barley	extracellular, vacuole	40.77	42.56
HORVU1Hr1G019520.1	Barley	golgi, mitochondrion, vacuole	40.77	41.84
HORVU5Hr1G081200.5	Barley	vacuole	39.12	41.55
HORVU6Hr1G081500.1	Barley	plastid	38.21	40.12
GSMUA_Achr4P12980_001	Banana	extracellular, vacuole	55.94	37.55

Protein Annotations

EnsemblPlants:HORVU6Hr1G022270.2	EnsemblPlantsGene:HORVU6Hr1G022270	Gene3D:1.50.10.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
InterPro:Glyco_hydro_9	InterPro:IPR012341	KEGG:00500+3.2.1.4	PANTHER:PTHR22298	PANTHER:PTHR22298:SF53	PFAM:PF00759
SEG:seg	SUPFAM:SSF48208	UniParc:UPI000B471854	UniProt:A0A287TKC2	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr6H:+:70238989..70243551

Molecular Weight (calculated)

60232.5 Da

IEP (calculated)

6.798

GRAVY (calculated)

-0.349

Length

547 amino acids

Sequence
(BLAST)

001: LRRAGGRSIA PSTLGYSQFL SWPARARAGR AVGEMSDVTG RFALAAAVVA VSLVMASASA ARHDYGDALS KSLLYFESQR SGRLPYNQRV RWRGHSGLTD
101: GLEQGVDLVG GYYDAGDHVK FGLPMAFTVT MLSWAVLEYG DQIAAAGEGA HALQSIKWGT DYFIKAHTAP NELWTQVGDG DSDHYCWQRP EDMTTSRRAY
201: KVDAEHPGSE VAAETAAAMA AASIVFRRAG DAHYAHLLLH HAQQLFEFAD KYRGRYDDSV RVVKSFYPSA SGYKDELLWA ALWLHRATGG RDYLDYVVSN
301: ADDFGGTGWG VSEFSWDIKY PGLQILASKN TNGGQLSSEY RTVLEKYRSK GEFYVCSNMN KNPGGAARNA PRTPAGLIFI RPWNNLQYVT NAVFLLTVHS
401: DHLAALGEPL RCTVVVGAEE VLAFAKAQAD YILGSNPMET SYLVGYGEQY PRRVHHRAAS TASLTDEKGF IGCTQGFDSW YSAGERNPHD LVGAVVGGPD
501: GEDRFNDQRG AYMQTEACTY NTAPMVGVFS RLMELHEKQR LREQRDL

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.