Factsheet for GSMUA_Achr4P12980_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 3
mitochondrion 1
vacuole 4
extracellular 4
endoplasmic reticulum 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P28200_001	Banana	endoplasmic reticulum, golgi, vacuole	40.0	71.02
GSMUA_Achr2P05330_001	Banana	vacuole	39.39	66.88
GSMUA_Achr8P25280_001	Banana	endoplasmic reticulum, extracellular, vacuole	36.81	62.5
PGSC0003DMT400001781	Potato	extracellular, vacuole	36.69	59.44
Solyc07g049300.2.1	Tomato	extracellular, vacuole	36.56	59.24
Zm00001d015292_P001	Maize	endoplasmic reticulum, extracellular, vacuole	37.79	58.56
AT2G32990.1	Thale cress	extracellular, vacuole	37.55	58.29
KRH73374	Soybean	vacuole	37.3	58.02
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	37.06	57.97
Os02t0151300-01	Rice	endoplasmic reticulum, extracellular, vacuole	37.91	57.87
CDY19428	Canola	vacuole	37.06	57.85
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	37.55	57.84
TraesCS6A01G122100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	37.42	57.66
EES06282	Sorghum	extracellular, vacuole	37.79	57.57
CDY17123	Canola	vacuole	36.81	57.47
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	37.3	57.47
Bra005536.1-P	Field mustard	vacuole	36.69	57.28
KRH14764	Soybean	cytosol, nucleus, vacuole	28.47	57.14
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	35.71	57.06
CDY19174	Canola	vacuole	36.69	56.74
CDY23776	Canola	vacuole	36.56	56.65
HORVU6Hr1G022270.2	Barley	mitochondrion	37.55	55.94
Bra021821.1-P	Field mustard	vacuole	34.72	55.6
GSMUA_Achr7P02160_001	Banana	vacuole	34.72	55.49
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	24.29	44.1
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	31.04	43.25
GSMUA_Achr5P05960_001	Banana	extracellular, vacuole	26.14	42.69
GSMUA_Achr11P...	Banana	extracellular, vacuole	25.64	41.3
GSMUA_Achr2P03770_001	Banana	vacuole	30.67	41.05
GSMUA_Achr8P12170_001	Banana	endoplasmic reticulum, extracellular, vacuole	22.7	40.93
GSMUA_Achr6P07430_001	Banana	extracellular, vacuole	23.07	40.69
GSMUA_Achr1P08170_001	Banana	endoplasmic reticulum, extracellular, vacuole	22.09	40.18
GSMUA_Achr1P07760_001	Banana	vacuole	24.54	39.92
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	21.47	39.77
GSMUA_Achr11P...	Banana	vacuole	23.8	38.8
GSMUA_Achr2P03400_001	Banana	extracellular	23.56	38.48
GSMUA_Achr11P...	Banana	cytosol	23.07	38.37
GSMUA_Achr6P22750_001	Banana	vacuole	23.31	36.54

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
EnsemblPlantsGene:GSMUA_Achr4G12980_001	EnsemblPlants:GSMUA_Achr4P12980_001	EnsemblPlants:GSMUA_Achr4T12980_001	InterPro:Glyco_hydro_9	InterPro:IPR012341	UniProt:M0SNG3
PFAM:PF00759	PANTHER:PTHR22298	PANTHER:PTHR22298:SF96	SUPFAM:SSF48208	UniParc:UPI0002964B79	SEG:seg

Description

Endoglucanase 7 [Source:GMGC_GENE;Acc:GSMUA_Achr4G12980_001]

Coordinates

chr4:+:9669560..9681264

Molecular Weight (calculated)

91644.4 Da

IEP (calculated)

6.593

GRAVY (calculated)

-0.688

Length

815 amino acids

Sequence
(BLAST)

001: MHLRTLCDVM WFRILQCMHL KSLHNIYIAF CCIQFFSWPF GVAASDYRDA LSKSLLYFEA QRSGRLPHDQ RVAWRGNSGL TDGLEQGVDL VGGYYDAGDH
101: VKFGLPMAFT ITMLSWSMVE YGDGVAEAGE LKHALEAIKW GTDYFIKAHT QPNVFWAQVG DGDTDHYCWQ RPEDMTTSRQ AYKIDAEHPG SEVAGETAAA
201: MAAASMVFQV INPHYSHVLL HHAQELFAFA DEHRGKYDDS IGAAVKSFYP SVSGYADELL WAALWLHRAT GREEYLDYVI RNADELNGTT WAISEFSWDI
301: KYAGLQILAS KLLMEKGKDL QAEQKTVLEE YRSKAEHYLC SCLNMNGEDG SNVHRTPAGL LFVRHWNNMQ YVAGAVFLLT SQVDYILGAN PAGSFIGCSQ
401: GYDEWYGSRS ENPNVLVGAL VGGPDDTDEF SDARGNHMQT EACTYNTALM VGVFAKLTTT YFDHSVRPVK HHPMEEAKAA AYYDELSRKG EGAARFKQGL
501: GFSSSSTTTS NSDRFPSKPK TSSSSLFSTF IRASSPNAKP PDEQHSRQAR LEVIQNKLNK ERRHHDYRRS LSPSPDRDRR RRRSSRDRDD CRSPSSSPDR
601: NRRRHEDSSH SRSRRRSWSR SPRRESRGAD RERKGGHEKE RGGEKHRSAS AKNGGGVDYS QLIEGYSNMT PAERVKAKMK LQLSETVAKD TDRGMGSGWE
701: RFDFNKEAPL DDDDEIEAAD DDASLVKNIG KSFRYSAVEA KREEEIKAAH DNAMFGASAA CADSPVLEME SVHVDVTEDA SDKTITDSLV SDKVIAMQQS
801: SWRDRARRFR NDSDS

Best Arabidopsis Sequence Match ( AT2G32990.1 )
(BLAST)

001: MTVMNHRHKQ CHFLLLLLIT VFSAALDGVS SETDVGGFDY GEALSKSLLY FEAQRSGRLP YNQRVTWRDH SGLTDGLEQG VDLVGGYHDA GDHVKFGLPM
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR

Arabidopsis Description

AtGH9B8Endoglucanase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48766]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.