Factsheet for GSMUA_Achr2P03770_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	63.05	62.44
Os04t0674800-01	Rice	extracellular	63.38	61.76
KRH24186	Soybean	extracellular, vacuole	63.05	61.05
Zm00001d026605_P001	Maize	vacuole	62.4	60.8
TraesCS2D01G557500.1	Wheat	extracellular	61.41	60.62
HORVU2Hr1G120100.1	Barley	extracellular	61.25	60.55
KRH29156	Soybean	extracellular, vacuole	61.9	60.13
EES13091	Sorghum	vacuole	62.07	60.0
PGSC0003DMT400051238	Potato	extracellular	62.07	59.81
TraesCS2B01G586600.1	Wheat	extracellular	60.26	59.77
Solyc02g014220.2.1	Tomato	extracellular	61.9	59.65
CDY60076	Canola	extracellular	23.48	59.09
TraesCS2A01G556300.1	Wheat	vacuole	61.41	57.98
Bra032270.1-P	Field mustard	extracellular	57.8	57.8
CDY59895	Canola	cytosol, vacuole	47.62	57.2
Bra018765.1-P	Field mustard	vacuole	58.46	57.05
CDX93707	Canola	vacuole	58.29	56.89
CDY60075	Canola	vacuole	58.29	56.71
CDY65179	Canola	extracellular	58.13	56.55
AT1G48930.1	Thale cress	vacuole	58.13	56.46
GSMUA_Achr3P28200_001	Banana	endoplasmic reticulum, golgi, vacuole	42.04	55.77
GSMUA_Achr2P05330_001	Banana	vacuole	42.36	53.75
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	39.41	53.45
GSMUA_Achr8P25280_001	Banana	endoplasmic reticulum, extracellular, vacuole	40.72	51.67
GSMUA_Achr7P02160_001	Banana	vacuole	43.19	51.57
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	42.53	50.78
GSMUA_Achr1P08170_001	Banana	endoplasmic reticulum, extracellular, vacuole	35.47	48.21
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	46.14	48.03
GSMUA_Achr11P...	Banana	extracellular, vacuole	39.74	47.83
GSMUA_Achr1P07760_001	Banana	vacuole	38.92	47.31
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	33.83	46.82
GSMUA_Achr5P05960_001	Banana	extracellular, vacuole	38.1	46.49
GSMUA_Achr8P12170_001	Banana	endoplasmic reticulum, extracellular, vacuole	34.48	46.46
GSMUA_Achr6P07430_001	Banana	extracellular, vacuole	34.98	46.1
GSMUA_Achr2P03400_001	Banana	extracellular	37.11	45.29
GSMUA_Achr11P...	Banana	cytosol	36.12	44.9
GSMUA_Achr11P...	Banana	vacuole	36.78	44.8
GSMUA_Achr6P22750_001	Banana	vacuole	36.95	43.27
GSMUA_Achr4P12980_001	Banana	extracellular, vacuole	41.05	30.67

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	InterPro:CBM_49
GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0016798	GO:GO:0030245	GO:GO:0030246	EnsemblPlantsGene:GSMUA_Achr2G03770_001	EnsemblPlants:GSMUA_Achr2P03770_001	EnsemblPlants:GSMUA_Achr2T03770_001
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	UniProt:M0S4W8	PFAM:PF00759
PFAM:PF09478	ScanProsite:PS00592	ScanProsite:PS00698	PFscan:PS51257	PANTHER:PTHR22298	PANTHER:PTHR22298:SF41
SMART:SM01063	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI000296BE46	SEG:seg	:

Description

Endoglucanase 13 [Source:GMGC_GENE;Acc:GSMUA_Achr2G03770_001]

Coordinates

chr2:-:9390625..9393401

Molecular Weight (calculated)

67511.5 Da

IEP (calculated)

4.949

GRAVY (calculated)

-0.214

Length

609 amino acids

Sequence
(BLAST)

001: MARPIMSFAL AALLLGCSLS SAAEDGFSYR EALTKSLLFF EAQRSGKLPA DQRVKWRGDS ALKDGFSQGV DLVGGYYDAG DHVKFGLPMA YAVTMLSWSV
101: IEFEKEIVDA GQLEFALDAI RWGTDYFVKA HRQPDLLWVQ VGDGDSDHIC WERAEDMTTP RTAYKVDCEH PGSEVAAETA AAMAAASIVF RPYDSKYSDL
201: LLLHARQLFS FADTYRGRYD DSVHSVRKYY PSSTGYSDEL LWAAAWLFEA TDDKSYLNYV AQNAVVLGGT GWAVTEFSWD NKYAGLQVLL SKVLVRGGGE
301: TCNATLNQYK AKAEFFLCAC LQKNNGDNVE MTPGGLLYFH DWQNLQYVSS AAFLSAVYSN YLRMANANLV CPDGQISPEM LLKFAESQAD YILGKNPKSM
401: SYLVGYGWNY PTHVHHRGAS VPSIFVLPSA VGCIDGFDYW YVNKDSNPNV IEGALVGGPD LKDEFYDDRC KYEQTEPSIA GNAPLVGLFA ALDGLEGDKG
501: SKQKSAGPNP KPNEAAVEFV HTITNTWKYQ GEDYYRHQVA VKNTCGERIT YLKLKIENLT GTLWGLSQTQ EKKMYELPPW LQVLEPGAGF VFVYIQGGPQ
601: AAVSVVAYR

Best Arabidopsis Sequence Match ( AT1G48930.1 )
(BLAST)

001: MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNRKELS SSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE TAAALAAASL AFKPFNSSYS
201: ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG
301: GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG
401: MSYVVGYGPK YPIRVHHRGS SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL SGTAPLVGLF AKLYGGSLGS
501: YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK
601: TLRAGQAYDF VYVQGGPQAK VSVLSYN

Arabidopsis Description

AtGH9C1Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.