Factsheet for TraesCS2A01G556300.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G557500.1	Wheat	extracellular	93.18	97.41
TraesCS2B01G586600.1	Wheat	extracellular	90.85	95.44
HORVU2Hr1G120100.1	Barley	extracellular	89.15	93.34
Os04t0674800-01	Rice	extracellular	72.56	74.88
Zm00001d026605_P001	Maize	vacuole	72.25	74.56
EES13091	Sorghum	vacuole	72.71	74.44
GSMUA_Achr2P03770_001	Banana	vacuole	57.98	61.41
CDY60076	Canola	extracellular	20.93	55.79
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	53.18	55.77
KRH24186	Soybean	extracellular, vacuole	53.95	55.33
Bra032270.1-P	Field mustard	extracellular	51.47	54.52
KRH29156	Soybean	extracellular, vacuole	52.87	54.39
CDY60075	Canola	vacuole	51.78	53.35
Solyc02g014220.2.1	Tomato	extracellular	52.25	53.32
CDY65179	Canola	extracellular	51.63	53.19
PGSC0003DMT400051238	Potato	extracellular	51.94	53.01
Bra018765.1-P	Field mustard	vacuole	51.16	52.88
CDY59895	Canola	cytosol, vacuole	41.55	52.86
CDX93707	Canola	vacuole	51.01	52.72
AT1G48930.1	Thale cress	vacuole	50.85	52.31
TraesCS6A01G122100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.33	51.61
TraesCS7A01G144400.1	Wheat	cytosol, vacuole	33.33	51.44
TraesCS5A01G202600.1	Wheat	vacuole	42.17	50.75
TraesCS7A01G144500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.47	50.68
TraesCS7A01G144700.1	Wheat	vacuole	40.31	50.19
TraesCS6A01G312400.1	Wheat	vacuole	41.86	50.09
TraesCS1A01G072100.1	Wheat	nucleus	37.05	48.78
TraesCS1A01G072300.1	Wheat	vacuole	36.59	47.77
TraesCS5A01G172100.1	Wheat	extracellular, vacuole	36.9	47.7
TraesCS3A01G144600.1	Wheat	extracellular, vacuole	46.05	47.14
TraesCS7A01G317700.1	Wheat	extracellular	35.97	46.96
TraesCS1A01G389300.1	Wheat	extracellular, vacuole	45.12	46.86
TraesCS6A01G295300.1	Wheat	extracellular	35.81	46.57
TraesCS7A01G197900.1	Wheat	extracellular, vacuole	42.02	46.48
TraesCS7A01G204500.1	Wheat	extracellular	35.97	46.12
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	37.67	46.11
TraesCS5A01G172200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	37.83	46.04
TraesCS6A01G093200.1	Wheat	golgi	34.88	45.27
TraesCS5A01G317400.1	Wheat	plastid	35.35	44.71
TraesCS1A01G088700.1	Wheat	extracellular	34.57	44.07
TraesCS2A01G310200.1	Wheat	vacuole	34.42	43.96
TraesCS6A01G337300.1	Wheat	mitochondrion	32.25	41.03

Protein Annotations

KEGG:00500+3.2.1.4	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:CBM_49	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0030246	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	PFAM:PF00759	PFAM:PF09478	ScanProsite:PS00592
PANTHER:PTHR22298	PANTHER:PTHR22298:SF41	SMART:SM01063	SUPFAM:SSF48208	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2A01G556300
EnsemblPlants:TraesCS2A01G556300.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:760597948..760601120

Molecular Weight (calculated)

70107.3 Da

IEP (calculated)

5.852

GRAVY (calculated)

-0.190

Length

645 amino acids

Sequence
(BLAST)

001: MARLTIASAA VALILLVASA EASPAWSDYA GAFDKSLQFF EAQRSGKLPA DRTVHWRGDS ALTDGFSQGV RARASIRRRT NSDRSSIRIC LWTKNGCVQV
101: DLVGGYYDAG DHVKFGFPAA YAVTMLSWGV LEFEKEMVAA NSLNRALDAI RWGTNYFIKA HTEPNTLWVQ VGDGDSDHLC WERAEDMSTP RTASKIDASR
201: PGSEVAAETA AALAAAAKVF RHYDSMYADL LLMHAKQIFT FADTFRGRYD DSLQCAKKFY PSASGYQDEL LWGAAWLYEA TGDEDYLDYV ARNADAFGGT
301: GWAVREFSWD NKYAGVQVLL SKVLLAGGGD GDYADTLKQF RAKAEFFMCA CIQKNGGNNV RTTPGGLLYV ADWNNMQYVS SSVFLLTVYA DYLAESGDKL
401: KCPDAEVAPA EIVAFARSQV DYVLGKNPLS MSYMVGHGDK FPTHVHHRGA SIPSVYAVND TVGCMEGFDA YYNSKGADPN VLVGALVGGP DGHDGFVDDR
501: CNYQRAEPTL AAAAPMCGVF ARLAAQPAAA GNSPGYQPPQ DTLHVGGAPL EFVHAVTNSW EYNGVDHYRH TVTAKNTCGH PITYLKLRIE GLTGPIYGVS
601: ATQDKEMYGF PSWVTRLDAG EKLTIVYIQE GGPAAKIAVA QYKTG

Best Arabidopsis Sequence Match ( AT1G48930.1 )
(BLAST)

001: MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNRKELS SSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE TAAALAAASL AFKPFNSSYS
201: ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG
301: GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG
401: MSYVVGYGPK YPIRVHHRGS SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL SGTAPLVGLF AKLYGGSLGS
501: YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK
601: TLRAGQAYDF VYVQGGPQAK VSVLSYN

Arabidopsis Description

AtGH9C1Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.