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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY60075 Canola vacuole 99.68 99.68
Bra032270.1-P Field mustard extracellular 96.81 99.51
CDY60076 Canola extracellular 38.02 98.35
CDX93707 Canola vacuole 91.85 92.15
CDY59895 Canola cytosol, vacuole 73.8 91.12
AT1G48930.1 Thale cress vacuole 90.1 89.95
VIT_01s0011g02170.t01 Wine grape endoplasmic reticulum, extracellular 67.09 68.29
PGSC0003DMT400051238 Potato extracellular 67.41 66.77
KRH24186 Soybean extracellular, vacuole 66.77 66.45
Solyc02g014220.2.1 Tomato extracellular 66.77 66.14
KRH29156 Soybean extracellular, vacuole 65.5 65.39
GSMUA_Achr2P03770_001 Banana vacuole 56.55 58.13
EES13091 Sorghum vacuole 55.75 55.4
Os04t0674800-01 Rice extracellular 54.95 55.04
Zm00001d026605_P001 Maize vacuole 54.79 54.88
TraesCS2D01G557500.1 Wheat extracellular 53.35 54.13
HORVU2Hr1G120100.1 Barley extracellular 52.72 53.57
TraesCS2B01G586600.1 Wheat extracellular 52.08 53.09
CDY19428 Canola vacuole 43.93 52.68
CDY17123 Canola vacuole 43.77 52.49
CDY19174 Canola vacuole 43.61 51.8
TraesCS2A01G556300.1 Wheat vacuole 53.19 51.63
CDY23776 Canola vacuole 43.29 51.52
CDX74667 Canola extracellular, vacuole 35.62 51.5
CDX90780 Canola endoplasmic reticulum, extracellular 51.44 51.44
CDX74666 Canola vacuole 40.1 51.33
CDY05130 Canola extracellular, vacuole 51.28 51.28
CDY47675 Canola vacuole 39.78 50.92
CDY47674 Canola extracellular, vacuole 39.62 50.3
CDX74664 Canola extracellular, vacuole 39.14 50.1
CDX74668 Canola extracellular 39.3 49.9
CDX83426 Canola extracellular, plastid, vacuole 38.02 49.69
CDY34422 Canola endoplasmic reticulum, extracellular, vacuole 49.04 49.52
CDY47849 Canola extracellular, vacuole 48.88 49.35
CDY46529 Canola extracellular, vacuole 48.88 49.28
CDY10945 Canola extracellular, vacuole 37.22 48.54
CDX94202 Canola vacuole 36.9 48.12
CDX95605 Canola extracellular, vacuole 38.18 47.9
CDY10895 Canola extracellular 36.42 47.5
CDY44116 Canola extracellular 36.42 47.5
CDY22399 Canola extracellular 36.26 46.14
CDX72723 Canola extracellular 35.78 45.53
CDX96319 Canola extracellular, plastid, vacuole 34.98 45.25
CDY25758 Canola extracellular, vacuole 34.82 45.13
CDY12503 Canola extracellular, vacuole 34.66 44.93
CDY66787 Canola extracellular, plastid, vacuole 34.66 44.83
CDY41954 Canola vacuole 33.39 44.75
CDY37936 Canola extracellular 32.43 44.52
CDY37939 Canola extracellular, vacuole 34.34 44.51
CDY21424 Canola extracellular 34.98 44.33
CDY04737 Canola extracellular, vacuole 34.82 44.31
CDY03686 Canola extracellular 34.19 44.31
CDX68334 Canola endoplasmic reticulum 34.34 44.06
CDY42599 Canola cytosol 33.39 44.0
CDY23486 Canola extracellular 34.19 43.85
CDY03687 Canola extracellular 33.87 43.8
CDY42597 Canola extracellular 32.59 43.68
CDX96271 Canola extracellular, vacuole 34.66 43.49
CDY11552 Canola endoplasmic reticulum, extracellular 34.66 43.49
CDY22043 Canola extracellular, vacuole 35.94 43.44
CDY08373 Canola cytosol, extracellular, mitochondrion, nucleus 29.23 43.36
CDY32480 Canola extracellular, vacuole 35.46 43.36
CDY52780 Canola extracellular, vacuole 35.78 43.24
CDX97262 Canola vacuole 35.46 43.19
CDY22400 Canola extracellular, vacuole 31.95 43.01
CDY41955 Canola extracellular, vacuole 33.87 42.83
CDY12319 Canola cytosol, extracellular, vacuole 33.23 42.8
CDX87948 Canola extracellular, vacuole 33.23 42.8
CDY37459 Canola endoplasmic reticulum, extracellular 34.66 42.55
CDY30943 Canola golgi, vacuole 32.75 42.18
CDY21221 Canola golgi, vacuole 32.75 42.18
CDY01915 Canola cytosol 22.68 39.12
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:A0A078JER8
UniProt:A0A078JER8InterPro:CBM_49EnsemblPlants:CDY65179ProteinID:CDY65179ProteinID:CDY65179.1GO:GO:0000272
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0008810GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0016798
GO:GO:0030245GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00045335001InterPro:Glyco_hydro_9InterPro:Glyco_hydro_9_His_ASInterPro:IPR012341
PFAM:PF00759PFAM:PF09478ScanProsite:PS00592PANTHER:PTHR22298PANTHER:PTHR22298:SF41MetaCyc:PWY-6788
SMART:SM01063SUPFAM:SSF48208SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE515ESEG:seg
Description
BnaCnng45930DEndoglucanase [Source:UniProtKB/TrEMBL;Acc:A0A078JER8]
Coordinates
chrLK034680:-:5570..8641
Molecular Weight (calculated)
69065.5 Da
IEP (calculated)
9.296
GRAVY (calculated)
-0.346
Length
626 amino acids
Sequence
(BLAST)
001: MSKFGGSLFG LNLLLTVLLG AATAAAEYYN YGNALDKTFL FFEAQRSGKL PAAQRVKWRS HSGLADGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNQKELS GSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGKSDH YCWERAEDMT TSRTAYKLDQ YHPGSDLAGE TAAALAAASL AFKPYNSSYS
201: AILLTHAKEL FSFADKYRGL YTDSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDEYYLKY AVNNAGYMGG TGWGMKEFSW DNKYAGVQVL LSKILLEGKG
301: GAYTSTLKQY QMKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAFLLAIYS DYLSAANAKL NCPDGSVPPQ ALLDFSRSQA DYILGKNRQG
401: MSYLVGYGPK YPIRVHHRGA SIPSIFVQRS SVNCVQGFDS WYRRAQADPN VIYGALVGGP DQNDYYSDDR TNYEQSEPTL SGTAPLIGLF AKLSGKLGSY
501: GGGYSKPYQT PKPPASAYKA APTIYTPKQS GAPIEFLHSI TANWMAWNTR YYRHKVIIKN NSQKPISGLK LKIEDLTGPI WGLNPTGQKN TYQLPQWQKT
601: LKAGQAYDFV YVQGGPQAKV SVLSYY
Best Arabidopsis Sequence Match ( AT1G48930.1 )
(BLAST)
001: MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNRKELS SSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE TAAALAAASL AFKPFNSSYS
201: ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG
301: GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG
401: MSYVVGYGPK YPIRVHHRGS SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL SGTAPLVGLF AKLYGGSLGS
501: YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK
601: TLRAGQAYDF VYVQGGPQAK VSVLSYN
Arabidopsis Description
AtGH9C1Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.