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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • vacuole 3
  • extracellular 3
  • endoplasmic reticulum 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:vacuole
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83426 Canola extracellular, plastid, vacuole 90.98 94.78
AT2G44570.1 Thale cress extracellular 79.76 80.89
CDX74668 Canola extracellular 74.55 75.46
CDY47674 Canola extracellular, vacuole 74.55 75.46
CDX74667 Canola extracellular, vacuole 61.32 70.67
CDX74666 Canola vacuole 68.34 69.73
CDX74664 Canola extracellular, vacuole 68.14 69.53
CDY47675 Canola vacuole 68.14 69.53
KRG89135 Soybean extracellular 58.52 60.21
VIT_13s0067g01190.t01 Wine grape extracellular, vacuole 57.11 59.01
GSMUA_Achr6P15630_001 Banana extracellular, vacuole 52.91 58.8
PGSC0003DMT400069884 Potato extracellular, vacuole 56.31 58.66
VIT_13s0067g01200.t01 Wine grape extracellular, vacuole 55.51 57.71
Solyc05g052530.1.1 Tomato extracellular 54.91 56.38
TraesCS1D01G074700.1 Wheat extracellular, vacuole 52.3 53.27
TraesCS1D01G075100.1 Wheat vacuole 52.1 53.06
TraesCS1D01G074900.1 Wheat cytosol, mitochondrion, plastid, vacuole 49.3 53.02
TraesCS1B01G090700.1 Wheat extracellular, vacuole 51.7 52.65
TraesCS1A01G072100.1 Wheat nucleus 51.7 52.65
TraesCS1A01G072300.1 Wheat vacuole 52.1 52.63
HORVU1Hr1G015550.1 Barley vacuole 50.5 51.43
TraesCS1D01G074800.1 Wheat vacuole 47.29 50.86
KXG21209 Sorghum cytosol 39.48 50.64
CDY60076 Canola extracellular 23.65 48.76
CDX94202 Canola vacuole 46.89 48.75
Zm00001d035442_P001 Maize extracellular, vacuole 40.68 48.68
CDY10945 Canola extracellular, vacuole 46.69 48.54
Os05t0129200-00 Rice endoplasmic reticulum, extracellular, vacuole 48.9 47.66
CDY44116 Canola extracellular 45.09 46.88
CDY10895 Canola extracellular 45.09 46.88
CDY42599 Canola cytosol 43.69 45.89
CDY12503 Canola extracellular, vacuole 44.29 45.76
CDY03687 Canola extracellular 44.29 45.66
CDY03686 Canola extracellular 43.89 45.34
CDY25758 Canola extracellular, vacuole 43.69 45.13
CDY37939 Canola extracellular, vacuole 43.49 44.93
CDY17123 Canola vacuole 46.49 44.44
CDY41955 Canola extracellular, vacuole 44.09 44.44
CDY19428 Canola vacuole 46.49 44.44
CDY22400 Canola extracellular, vacuole 41.28 44.3
CDY37936 Canola extracellular 40.48 44.3
CDY32480 Canola extracellular, vacuole 45.29 44.14
CDX96319 Canola extracellular, plastid, vacuole 42.69 44.01
CDY23776 Canola vacuole 46.29 43.92
CDY41954 Canola vacuole 41.08 43.9
CDY42597 Canola extracellular 41.08 43.9
CDY23486 Canola extracellular 42.89 43.85
CDY30943 Canola golgi, vacuole 42.69 43.83
CDY21221 Canola golgi, vacuole 42.69 43.83
CDY37459 Canola endoplasmic reticulum, extracellular 44.69 43.73
CDX87948 Canola extracellular, vacuole 42.48 43.62
CDY12319 Canola cytosol, extracellular, vacuole 42.48 43.62
CDY22399 Canola extracellular 42.89 43.5
CDX68334 Canola endoplasmic reticulum 42.48 43.44
CDY66787 Canola extracellular, plastid, vacuole 42.08 43.39
CDX72723 Canola extracellular 42.48 43.09
CDY19174 Canola vacuole 45.49 43.07
CDY04737 Canola extracellular, vacuole 42.28 42.89
CDX96271 Canola extracellular, vacuole 42.69 42.69
CDY11552 Canola endoplasmic reticulum, extracellular 42.69 42.69
CDY21424 Canola extracellular 41.88 42.31
CDX97262 Canola vacuole 43.29 42.02
CDY52780 Canola extracellular, vacuole 43.29 41.7
CDY22043 Canola extracellular, vacuole 43.09 41.51
CDX93707 Canola vacuole 48.1 38.46
CDY65179 Canola extracellular 47.9 38.18
CDY60075 Canola vacuole 47.9 38.18
CDY47849 Canola extracellular, vacuole 46.89 37.74
CDY34422 Canola endoplasmic reticulum, extracellular, vacuole 46.89 37.74
CDY59895 Canola cytosol, vacuole 38.28 37.67
CDY46529 Canola extracellular, vacuole 46.69 37.52
CDY01915 Canola cytosol 27.25 37.47
CDX90780 Canola endoplasmic reticulum, extracellular 46.89 37.38
CDY05130 Canola extracellular, vacuole 46.89 37.38
CDY08373 Canola cytosol, extracellular, mitochondrion, nucleus 25.05 29.62
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:A0A078E1K9
EnsemblPlants:CDX95605ProteinID:CDX95605ProteinID:CDX95605.1GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008810GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00101476001
InterPro:Glyco_hydro_9InterPro:Glyco_hydro_9_His_ASInterPro:IPR012341PFAM:PF00759ScanProsite:PS00592PANTHER:PTHR22298
PANTHER:PTHR22298:SF12MetaCyc:PWY-6788SUPFAM:SSF48208SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EEC88E
SEG:seg:::::
Description
BnaC03g24860D
Coordinates
chrLK031890:-:207299..209213
Molecular Weight (calculated)
54755.6 Da
IEP (calculated)
6.273
GRAVY (calculated)
-0.228
Length
499 amino acids
Sequence
(BLAST)
001: MYCVLRTRSS QCFLTMQSMC IVLLLLSITS GKVSAGLNYG EALTKSLLYF EAQRSGKLPS DQIVEWRGDS APGDGSDVNI DLSGGYYDAG DNMKFGFPLA
101: FTTTMLAWGS VEMASQFQAH NEHQNVLVAL KWATDYLIKA HPEPNVLYGQ VGDVKLDHKC WMRPEDMINT SHPRPSYRID AQHPGADLAG ETAAAMAAAS
201: LAFAPFDAAY AKTLTSHAKD LFEFGKNHPG VYHDSITNAA GFYSSSGHED ELLWAAAWLH RATGDQMYLD YLTQASNSGG VRFAFSWDDK FVGAQVLAAK
301: LVFEGKVKNE GKMAEYKRMA EQFICNCAQK GYSNVKKTPG GLLWFFPWEN LQYTATASFV LSSYSKYLEA AQASVQCPNG VLQASDLLGL ARAQVDYILG
401: SNPKSMSYMV GFGTNYPNRP HHRGASIVSI KKDPKLKECS EGWKPWYNTS EPNPNVLVGA IVGGPDMNDV YQDERSDFQH NEPATVTVAP FVGVFAALA
Best Arabidopsis Sequence Match ( AT2G44570.1 )
(BLAST)
001: MSCISSQCFI TIKSICIVLL LSITCGAVSA NSNYGEALTK SLLYFEAQRS GKLPLDQRVI WRGDSALRDG SDAHVDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSSVEMES QLKAHQEHGN TLAALRWATD YLIKAHPEPN VLYGQVGDAN LDHACWMRPE DMTTPRPSYR IDPQHPGADL AGETAAAMAA ASLAFAPSDS
201: AYAKTLISHA KELFEFAKDY PGVYHNSIPN AGGFYPSSGY EDELLWAAAW LHRATGDQTY LDHLTQASNS GGARSVFAWD DKFLGAQVLV AKLVFEGKVK
301: NEGKMIEYKS MAEQFICNCA QKGFNNVKKT PGGLLWFLPW DNLQYTATAS FALATYAKYL EAAQTSIQCP NGDVLQASDL LNLARAQVDY ILGSNPKKMS
401: YMVGYGTNYP KRPHHRGASI VSIKNDPKPV TCNGGFEAWY NNPKPNPNLL VGAIVGGPDE YDAYGDERSD FQHGEPDTVT VAPLLGVLAA IA
Arabidopsis Description
AtGH9B12Endoglucanase 15 [Source:UniProtKB/Swiss-Prot;Acc:O80497]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.