Factsheet for TraesCS1B01G090700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G072100.1	Wheat	nucleus	93.27	93.27
TraesCS1A01G072300.1	Wheat	vacuole	93.47	92.71
TraesCS1D01G074800.1	Wheat	vacuole	87.55	92.46
HORVU1Hr1G015550.1	Barley	vacuole	91.43	91.43
KXG21209	Sorghum	cytosol	53.06	66.84
Zm00001d035442_P001	Maize	extracellular, vacuole	54.29	63.79
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	66.33	63.48
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	52.86	57.68
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	55.31	56.46
PGSC0003DMT400069884	Potato	extracellular, vacuole	54.69	55.95
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	55.1	55.9
Bra004846.1-P	Field mustard	nucleus	53.06	55.32
AT2G44550.1	Thale cress	extracellular, plasma membrane, vacuole	55.1	55.1
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	53.47	55.04
AT2G44540.1	Thale cress	vacuole	54.9	54.79
CDX83426	Canola	extracellular, plastid, vacuole	53.47	54.7
AT2G44560.1	Thale cress	extracellular, vacuole	54.49	54.38
AT2G44570.1	Thale cress	extracellular	54.49	54.27
Solyc05g052530.1.1	Tomato	extracellular	53.47	53.91
CDX74668	Canola	extracellular	53.47	53.14
CDX74666	Canola	vacuole	52.45	52.56
CDX74667	Canola	extracellular, vacuole	46.33	52.42
CDY47674	Canola	extracellular, vacuole	52.65	52.33
KRG89135	Soybean	extracellular	51.63	52.16
Bra004845.1-P	Field mustard	extracellular	52.04	52.15
CDY47675	Canola	vacuole	51.84	51.94
CDX95605	Canola	extracellular, vacuole	52.65	51.7
CDX74664	Canola	extracellular, vacuole	51.43	51.53
Bra004844.1-P	Field mustard	extracellular, vacuole	50.82	50.92
TraesCS7B01G219100.1	Wheat	extracellular	48.98	48.58
TraesCS5B01G169600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.98	48.29
TraesCS5B01G169500.1	Wheat	unclear	48.98	48.1
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	48.57	47.89
TraesCS7B01G046900.1	Wheat	vacuole	48.78	46.14
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	49.18	45.56
TraesCS7B01G047000.1	Wheat	extracellular, vacuole	47.55	45.24
TraesCS6B01G342600.1	Wheat	vacuole	48.78	44.84
TraesCS5B01G201100.1	Wheat	vacuole	48.98	44.53
TraesCS7B01G104600.1	Wheat	vacuole	48.16	44.28
TraesCS1B01G107700.1	Wheat	extracellular	45.1	43.68
TraesCS5B01G318000.1	Wheat	vacuole	45.71	43.66
TraesCS6B01G325400.1	Wheat	extracellular	43.88	43.35
TraesCS2B01G327200.1	Wheat	nucleus	44.08	42.52
TraesCS6B01G122000.1	Wheat	vacuole	35.1	41.95
TraesCS7B01G111700.1	Wheat	extracellular	45.1	41.86
TraesCS6B01G368000.1	Wheat	extracellular	41.63	40.88
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	50.61	40.0
TraesCS2B01G586600.1	Wheat	extracellular	48.16	38.44

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PFscan:PS51257
PANTHER:PTHR22298	PANTHER:PTHR22298:SF12	SUPFAM:SSF48208	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS1B01G090700	EnsemblPlants:TraesCS1B01G090700.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:91880068..91882340

Molecular Weight (calculated)

52922.4 Da

IEP (calculated)

8.797

GRAVY (calculated)

-0.274

Length

490 amino acids

Sequence
(BLAST)

001: MVASARMLLV AAVVGFLATT ACQAAQRNYA TALTKSLLYF EAQRSGRLPP TQRVQWRGNS ALKDGADHGV DLTGGYYDSG DNVKFGFPMA FTATMLSWSV
101: VEHRGRLAAA GELGHALEAV RWGADYLAKA HARPDVLYVN VGDGDSDHAC WERPEDMDTP RRSYLVNATH PGSDVAAETA AALAAASVAF TGPRGDSRYA
201: STLLKHAKQL FQFAKNNRGL YQNSIPSARS FYSSSGDEDE LLWAAVWLYI ATGHHEYKAY IAGANNVGGV RQSLSWDDKF VGAQALVAKL ILQGKLPNNG
301: RHAEMRSNVE SFLCNVVQHG DGRSGRLTPG GMLYLQPWSN LQDVTTAMFV LVTHADHLAA ARASLQCGGV RLPPAQLVSF ARSQADYILG KNPMKMSYMV
401: GVGKRYPTQP HHRGASLPSL TNNPGKISCG KGSEYFHRSA PNLNVIDGAI VGGPDNNDHY DDSRGNYQQG EPSTYTVAPI VGVLARLLHN

Best Arabidopsis Sequence Match ( AT2G44550.1 )
(BLAST)

001: MSQLKNGSSQ CLWTSICIVL IVMSMAREAV STNYAEALKN SLLYFEAQRS GKLPPNQRVT WRGDSALRDG SDAHIDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSNIEMAS QLRAHHEKGN ALRALKWATD YLIKAHPQPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL AGETAAAMAA ASIAFAPSDK
201: AYANILIGHA KDLFAFAKAH RGLYQNSIPN AGGFYASSGY EDELLWAAAW LHRATNDQIY LDYLTEAETG GPRTVFAWDD KFVGAQVLVA KLALEGKVES
301: SEQIVEYKSM AEQFICNCAQ KGDNNVKKTP GGLLYFLPWN NLQYTTAATF VLSAYSKYLE AAKASIDCPD GALQASDLLQ VARSQVDYIL GSNPQKMSYM
401: VGVGTNYPKK PHHRAASIVS IRQDKTPVTC SGGYDKWYNN PAPNPNVLAG AVVGGPDDND VYGDERSNFQ QAEPATVTTA PLVGVLALVF

Arabidopsis Description

AtGH9B10Endoglucanase 13 [Source:UniProtKB/Swiss-Prot;Acc:O64890]
SUBAcon: [extracellular,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.