Factsheet for TraesCS6B01G368000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	98.4	96.65
TraesCS6A01G337300.1	Wheat	mitochondrion	97.8	96.25
HORVU6Hr1G081500.1	Barley	plastid	93.59	89.64
Os02t0778600-01	Rice	plasma membrane	79.76	79.44
EES05890	Sorghum	vacuole	76.75	77.06
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	55.11	62.22
VIT_04s0008g02020.t01	Wine grape	vacuole	60.52	62.14
GSMUA_Achr6P22750_001	Banana	vacuole	64.53	61.92
KRH52262	Soybean	extracellular, vacuole	59.32	61.28
CDY21221	Canola	golgi, vacuole	59.52	61.11
CDY30943	Canola	golgi, vacuole	59.52	61.11
KRH52260	Soybean	extracellular, vacuole	59.12	61.08
Bra019455.1-P	Field mustard	golgi, vacuole	59.32	60.91
CDY12319	Canola	cytosol, extracellular, vacuole	59.32	60.91
AT3G43860.1	Thale cress	extracellular, vacuole	59.32	60.91
CDX87948	Canola	extracellular, vacuole	59.32	60.91
PGSC0003DMT400052749	Potato	extracellular, vacuole	58.72	60.29
VIT_04s0008g02010.t01	Wine grape	vacuole	57.92	59.1
Solyc06g066120.2.1	Tomato	extracellular, vacuole	57.31	58.85
TraesCS7B01G219100.1	Wheat	extracellular	45.09	45.55
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	44.49	44.67
TraesCS5B01G169500.1	Wheat	unclear	43.09	43.09
TraesCS5B01G169600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.89	43.06
TraesCS1B01G107700.1	Wheat	extracellular	42.89	42.29
TraesCS6B01G325400.1	Wheat	extracellular	41.88	42.14
TraesCS5B01G318000.1	Wheat	vacuole	43.29	42.11
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	40.88	41.63
TraesCS7B01G047000.1	Wheat	extracellular, vacuole	41.68	40.39
TraesCS7B01G046900.1	Wheat	vacuole	41.68	40.15
TraesCS6B01G342600.1	Wheat	vacuole	42.48	39.77
TraesCS2B01G327200.1	Wheat	nucleus	40.28	39.57
TraesCS7B01G111700.1	Wheat	extracellular	41.48	39.2
TraesCS6B01G122000.1	Wheat	vacuole	32.06	39.02
TraesCS7B01G104600.1	Wheat	vacuole	41.28	38.65
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.48	38.19
TraesCS5B01G201100.1	Wheat	vacuole	39.88	36.92
TraesCS2B01G586600.1	Wheat	extracellular	42.08	34.2
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	42.08	33.87

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298
PANTHER:PTHR22298:SF31	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G368000	EnsemblPlants:TraesCS6B01G368000.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:641909891..641911963

Molecular Weight (calculated)

54536.0 Da

IEP (calculated)

7.740

GRAVY (calculated)

-0.236

Length

499 amino acids

Sequence
(BLAST)

001: MKKKHTPASC VALLLAALVL SGDVAGATSF NYKDALTKSI LFLEAQRSGK LPPDNRIKWR GDSGMEDGKL AHVDLTGGYY DAGDNVKYGL PLAFTVTTLA
101: WAALAFKPEL QAAGELKHVQ EAIRWGTDYM LKCAAKKNHM WVQVGDPNLD HQCWVRPENM PTPRTLYQID GNTPGTEIAA ETAAALAASA MVFRNDKNYA
201: RRLMNKAKLL YQFAKTHLKT YDGECPFYCS YSGYNDELLW AATWLFMATK RQVYADFITH EAISSSVAEF SWDLKYPGAQ ILLAPHNMNA SGGMQSYKTQ
301: ADNFVCAVLP DTPFHQVFIT PGGMIHLRDG ANSQYVTGTA FLFLVYADWL DTARQDVMCG ATPIKPARLR EFAKQQMDYL LGANPRGRSY VVGFGANPPT
401: QPHHRGASTP VLKPGTVVNC GMSFGDWFAP DRPNPNELTG AIMGGPDGAD NFIDKRNASA CTEPCTYINS LAIGALAALA GRGPNLVASQ SQSHGYDQM

Best Arabidopsis Sequence Match ( AT3G43860.1 )
(BLAST)

001: MANYKGRGNV MIRSMLLGLY GIINIVCVNG TFINYKDALT KSLIFLEAQR SGKLPPNNRV PWRGDSALDD GKLVNVDLSG GYYDAGDNVK YGLPMAFTIT
101: TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
201: HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301: YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
401: NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA

Arabidopsis Description

AtGH9A4Endoglucanase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.