CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0778600-01	Rice	plasma membrane	78.67	78.04
TraesCS6B01G368000.1	Wheat	extracellular	77.06	76.75
TraesCS6A01G337300.1	Wheat	mitochondrion	77.26	75.74
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	77.06	75.39
HORVU6Hr1G081500.1	Barley	plastid	77.87	74.28
VIT_04s0008g02020.t01	Wine grape	vacuole	61.97	63.37
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	56.34	63.35
GSMUA_Achr6P22750_001	Banana	vacuole	65.79	62.88
KRH52260	Soybean	extracellular, vacuole	60.16	61.9
CDX87948	Canola	extracellular, vacuole	60.36	61.73
CDY12319	Canola	cytosol, extracellular, vacuole	60.36	61.73
AT3G43860.1	Thale cress	extracellular, vacuole	60.16	61.52
Bra019455.1-P	Field mustard	golgi, vacuole	59.96	61.32
CDY21221	Canola	golgi, vacuole	59.96	61.32
CDY30943	Canola	golgi, vacuole	59.96	61.32
KRH52262	Soybean	extracellular, vacuole	59.15	60.87
PGSC0003DMT400052749	Potato	extracellular, vacuole	58.95	60.29
VIT_04s0008g02010.t01	Wine grape	vacuole	59.15	60.12
Solyc06g066120.2.1	Tomato	extracellular, vacuole	57.95	59.26
EES13257	Sorghum	extracellular	45.47	45.02
EES00659	Sorghum	vacuole	44.67	44.31
EES04405	Sorghum	plasma membrane, vacuole	45.07	43.58
KXG21209	Sorghum	cytosol	33.4	42.67
EES07307	Sorghum	vacuole	43.26	42.66
EES13778	Sorghum	extracellular	44.27	42.55
EES15002	Sorghum	endoplasmic reticulum, extracellular	42.05	41.3
EES12225	Sorghum	plastid	42.05	40.58
EES06282	Sorghum	extracellular, vacuole	42.25	39.25
EER98860	Sorghum	golgi, mitochondrion, vacuole	42.05	38.56
OQU76161	Sorghum	vacuole	33.6	37.87
EER89549	Sorghum	mitochondrion	42.45	37.54
OQU89810	Sorghum	extracellular, plastid, vacuole	41.65	37.03
EES13091	Sorghum	vacuole	44.87	35.4
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	45.88	34.86
EES19222	Sorghum	vacuole	43.06	34.13
EES07289	Sorghum	mitochondrion	42.25	27.7
KXG31545	Sorghum	cytosol	26.96	24.63

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EntrezGene:8082678
UniProt:C5XTL8	EnsemblPlants:EES05890	ProteinID:EES05890	ProteinID:EES05890.1	GO:GO:0000272	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9
InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF31
MetaCyc:PWY-6788	EnsemblPlantsGene:SORBI_3004G318300	SUPFAM:SSF48208	unigene:Sbi.5574	SignalP:SignalP-noTM	UniParc:UPI0001A85A44
RefSeq:XP_002452914.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:65387121..65389855

Molecular Weight (calculated)

54235.3 Da

IEP (calculated)

7.019

GRAVY (calculated)

-0.163

Length

497 amino acids

Sequence
(BLAST)

001: MRALSHGSSM RAHVALALAA LVLAGDALHP SLAAAGFDYK DALSKTIIFL EAQRSGKLPP NNRVKWRGDS ALDDGKLANV DLTGGYYDAG DNVKYGLPLA
101: FTVTTLAWTV LAFKPELEQT KELEHVHEAI RWGTDYLLKC AARKNKLWVQ VGDPNLDHQC WVRPENMKAP RTLYEIDEKT PGTEIAAETA AAFAASSMVF
201: RNDKKYSRAL LNKAKLLFLF AKAHQGSYDG ECPFYCSYSG YNDELLWAAT WLYLATKRQV YADFITHEAI SSSVAEFSWD LKFPGAQVLL AEFNMTSGGG
301: AQNFKVQADN FVCAVLPDTP FHQVFITPGG VIHLRDGANT QYVTSTSFLF VVYSDLLLRT GQSVMCGNQP VAPARLREFA RQQMDYLLGA NPRHSSYVVG
401: FGANSPTQPH HRGASTPVLP PGTDVNCGLS FGEWMAPDRP NPNELTGAIV GGPDKNDGFV DKRGNSSYTE PCTYINSLAI GPLAALAVRG AQLVATH

Best Arabidopsis Sequence Match ( AT3G43860.1 )
(BLAST)

001: MANYKGRGNV MIRSMLLGLY GIINIVCVNG TFINYKDALT KSLIFLEAQR SGKLPPNNRV PWRGDSALDD GKLVNVDLSG GYYDAGDNVK YGLPMAFTIT
101: TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
201: HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301: YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
401: NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA

Arabidopsis Description

AtGH9A4Endoglucanase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.