CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, vacuole

Predictor Summary:

nucleus 2
mitochondrion 3
vacuole 3
plasma membrane 3
extracellular 2
endoplasmic reticulum 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, vacuole
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020371_P001	Maize	mitochondrion	90.96	91.47
Os09t0394300-01	Rice	extracellular, vacuole	66.05	81.18
TraesCS5A01G202600.1	Wheat	vacuole	78.6	79.48
TraesCS5D01G208900.1	Wheat	vacuole	77.31	78.17
TraesCS5B01G201100.1	Wheat	vacuole	77.68	78.11
EES15002	Sorghum	endoplasmic reticulum, extracellular	65.68	70.36
HORVU5Hr1G060140.1	Barley	vacuole	72.51	67.99
OQU76161	Sorghum	vacuole	54.61	67.12
Solyc07g049300.2.1	Tomato	extracellular, vacuole	61.07	65.81
PGSC0003DMT400001781	Potato	extracellular, vacuole	61.07	65.81
CDY17123	Canola	vacuole	62.36	64.75
Bra005536.1-P	Field mustard	vacuole	62.18	64.56
CDY19428	Canola	vacuole	62.18	64.56
AT2G32990.1	Thale cress	extracellular, vacuole	62.18	64.19
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	61.62	64.11
GSMUA_Achr7P02160_001	Banana	vacuole	60.15	63.92
CDY19174	Canola	vacuole	61.99	63.76
Bra021821.1-P	Field mustard	vacuole	59.23	63.06
CDY23776	Canola	vacuole	61.07	62.93
KRH73374	Soybean	vacuole	59.78	61.83
KRH14764	Soybean	cytosol, nucleus, vacuole	46.31	61.82
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	57.75	61.37
EES06282	Sorghum	extracellular, vacuole	60.52	61.31
KXG21209	Sorghum	cytosol	36.35	50.64
EES07289	Sorghum	mitochondrion	66.79	47.76
EES19222	Sorghum	vacuole	54.06	46.73
EES07307	Sorghum	vacuole	42.8	46.03
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	55.54	46.02
EES13257	Sorghum	extracellular	42.62	46.02
EES00659	Sorghum	vacuole	41.51	44.91
EES04405	Sorghum	plasma membrane, vacuole	42.25	44.55
EES13091	Sorghum	vacuole	51.29	44.13
EES13778	Sorghum	extracellular	41.14	43.13
EES05890	Sorghum	vacuole	38.56	42.05
EER89549	Sorghum	mitochondrion	43.36	41.81
EES12225	Sorghum	plastid	38.93	40.97
OQU89810	Sorghum	extracellular, plastid, vacuole	40.41	39.18
KXG31545	Sorghum	cytosol	32.84	32.72

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EntrezGene:8056224
UniProt:C5XC34	EnsemblPlants:EER98860	ProteinID:EER98860	ProteinID:EER98860.1	GO:GO:0000272	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9
InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF43
MetaCyc:PWY-6788	EnsemblPlantsGene:SORBI_3002G193600	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A83F52
RefSeq:XP_002462339.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:58015513..58026010

Molecular Weight (calculated)

59532.1 Da

IEP (calculated)

7.107

GRAVY (calculated)

-0.300

Length

542 amino acids

Sequence
(BLAST)

001: MSRGRARRRP VPGSVDIRFG ALLLLLLLAS AVLLAAASSS EEEEVDYGAA LSKSLLYFEA QRSGRLPHNQ RVPWRGHSGL TDGLQQGVDL VGGYYDAGDH
101: VKFGLPMAFT VTMLSWGAID FADDVAAAGE WGHTLEAIKW GTDYFVKAHT EPFVYWAEVG DGDTDHYCWQ RPEDMTTSRQ AYRIDKDNPG SDLAGETAAA
201: LAAASIVFRR SNPHYSHLLL HHAQQLFEFG DRYRGTYDSS IAEVRSYYAS VSGYQDELLW AALWLHRATG RDDYLRYAVD KAESFGGVGW AMTEFSWDVK
301: YAGVQVLAAK LLLEGDPGAL KHGAVLEQYK AKAEHYLCAC LGRNGGGNGS DNVERSPGGM LYVRQWNNLQ YVSSAAFLLT AYSRYLSDSG GGGLLLRCPA
401: GGGPAAPSDL LALARSQADY ILGRNPLRLS YMVGYGRRYP VRVHHRGASI VAHKANSRFI GCMQGFDDWF GRGRPNPNVL AGAIVGGPNC RDEFRDDRGN
501: YMQTEACTYN TAPMVGVFAR LHRLATAEGC RRRGMADEAE CR

Best Arabidopsis Sequence Match ( AT2G32990.1 )
(BLAST)

001: MTVMNHRHKQ CHFLLLLLIT VFSAALDGVS SETDVGGFDY GEALSKSLLY FEAQRSGRLP YNQRVTWRDH SGLTDGLEQG VDLVGGYHDA GDHVKFGLPM
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR

Arabidopsis Description

AtGH9B8Endoglucanase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48766]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.