CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009097_P001	Maize	extracellular	93.61	90.19
Os01t0312800-01	Rice	extracellular	84.83	85.17
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	81.84	82.33
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	81.64	82.29
HORVU1Hr1G079980.3	Barley	extracellular, vacuole	81.64	78.05
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	82.04	77.99
GSMUA_Achr11P...	Banana	extracellular, vacuole	70.86	70.16
KRH31855	Soybean	nucleus	70.46	69.9
KRH69273	Soybean	extracellular, vacuole	70.46	69.63
KRH68213	Soybean	nucleus	68.86	69.0
VIT_07s0005g00740.t01	Wine grape	plastid	70.06	68.69
PGSC0003DMT400081314	Potato	extracellular	68.46	68.6
Solyc09g075360.2.1	Tomato	plastid	68.66	67.45
CDY22043	Canola	extracellular, vacuole	69.46	67.18
Bra036281.1-P	Field mustard	extracellular, vacuole	69.26	66.99
CDY52780	Canola	extracellular, vacuole	69.26	66.99
Bra018559.1-P	Field mustard	extracellular, vacuole	68.66	66.93
AT4G02290.1	Thale cress	plastid	68.86	66.86
CDX97262	Canola	vacuole	68.46	66.73
AT1G02800.1	Thale cress	extracellular, vacuole	66.47	66.47
KRG96467	Soybean	extracellular, vacuole	55.09	66.35
CDY37459	Canola	endoplasmic reticulum, extracellular	66.07	64.9
CDY32480	Canola	extracellular, vacuole	66.27	64.84
Bra032584.1-P	Field mustard	extracellular, vacuole	66.47	64.41
CDY01915	Canola	cytosol	44.11	60.88
EES07307	Sorghum	vacuole	59.08	58.73
EES13257	Sorghum	extracellular	58.48	58.37
EES04405	Sorghum	plasma membrane, vacuole	58.68	57.2
EES12225	Sorghum	plastid	56.69	55.15
EER89549	Sorghum	mitochondrion	59.08	52.67
OQU89810	Sorghum	extracellular, plastid, vacuole	58.68	52.59
KXG21209	Sorghum	cytosol	36.13	46.53
EES13778	Sorghum	extracellular	47.9	46.42
EES15002	Sorghum	endoplasmic reticulum, extracellular	45.71	45.26
EES05890	Sorghum	vacuole	44.31	44.67
OQU76161	Sorghum	vacuole	38.52	43.76
EES06282	Sorghum	extracellular, vacuole	46.11	43.18
EER98860	Sorghum	golgi, mitochondrion, vacuole	44.91	41.51
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	51.9	39.76
EES19222	Sorghum	vacuole	49.3	39.39
EES13091	Sorghum	vacuole	47.7	37.94
EES07289	Sorghum	mitochondrion	49.3	32.59
KXG31545	Sorghum	cytosol	30.34	27.94

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EntrezGene:8060348
UniProt:C5XIT7	EnsemblPlants:EES00659	ProteinID:EES00659	ProteinID:EES00659.1	GO:GO:0000272	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9
InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF55
MetaCyc:PWY-6788	EnsemblPlantsGene:SORBI_3003G148500	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI0001A8445E	RefSeq:XP_002455539.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:15435941..15438030

Molecular Weight (calculated)

54446.5 Da

IEP (calculated)

9.100

GRAVY (calculated)

-0.190

Length

501 amino acids

Sequence
(BLAST)

001: MARLRCLLVA FVVFAAALRL PGDAIASRGH HGPAAHDYRD ALAKSILFFE GQRSGKLPPS QRVSWRRDSG LSDGSAAKVD LVGGYHDAGD NVKFGFPMAF
101: SMTMLAWSVV EFGGLMKSEL PHARDAVRWG ADYLLKATAH PDTIYVQVGD ATKDHACWER PEDMDTPRTV YKVDARTPGS DVAAETAAAL AAASLVFRKS
201: DPAYASRLVA RAKRVFEFAD KHRGAYSTGL AADVCPYYCS YSGYQDELLW GAAWLHRATR SATYLSYIQS NGAVLGADES DNTFGWDNKH AGARVLIAKS
301: FLVQRQGALR EYKSHADGFI CSMVPGTATD QTQYTRGGLL FRLSDSNMQY VTSSAFLMLT YAKYLAFAKT TVRCGGVAVT PHRLRAVARR QVDYLLGSNP
401: MGMSYMVGYG GRYPRRIHHR ASSLPSVAAH PGRIGCSQGF TALYAGGANP NVLVGAVVGG PDMQDRFPDE RNDHEHSEPA TYINAPLVGA LAYLAHSYGQ
501: L

Best Arabidopsis Sequence Match ( AT4G02290.1 )
(BLAST)

001: MALLLVSSSS SYALRVTIFL SFFFFLCNGF SYPTTSSLFN THHHRHHLAK HNYKDALTKS ILFFEGQRSG KLPSNQRMSW RRDSGLSDGS ALHVDLVGGY
101: YDAGDNIKFG FPMAFTTTML SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD TVRSVFKVDK NIPGSDVAAE
201: TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301: WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR
401: SIAKRQVDYL LGDNPLRMSY MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD RFPDERSDYE QSEPATYINS
501: PLVGALAYFA HAYGQL

Arabidopsis Description

AtGH9B13Endoglucanase 17 [Source:UniProtKB/Swiss-Prot;Acc:O81416]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.