CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
nucleus 1
extracellular 5
endoplasmic reticulum 3
vacuole 5
plasma membrane 4
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026605_P001	Maize	vacuole	91.9	92.64
Os04t0674800-01	Rice	extracellular	76.35	76.96
TraesCS2D01G557500.1	Wheat	extracellular	75.08	76.66
TraesCS2B01G586600.1	Wheat	extracellular	73.65	75.57
HORVU2Hr1G120100.1	Barley	extracellular	73.81	75.49
TraesCS2A01G556300.1	Wheat	vacuole	74.44	72.71
GSMUA_Achr2P03770_001	Banana	vacuole	60.0	62.07
CDY60076	Canola	extracellular	23.02	59.92
KRH24186	Soybean	extracellular, vacuole	58.57	58.66
KRH29156	Soybean	extracellular, vacuole	57.94	58.21
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	56.67	58.05
Bra032270.1-P	Field mustard	extracellular	55.56	57.47
CDY60075	Canola	vacuole	55.56	55.91
CDY65179	Canola	extracellular	55.4	55.75
Bra018765.1-P	Field mustard	vacuole	55.08	55.61
CDX93707	Canola	vacuole	54.92	55.45
Solyc02g014220.2.1	Tomato	extracellular	55.56	55.38
PGSC0003DMT400051238	Potato	extracellular	55.56	55.38
CDY59895	Canola	cytosol, vacuole	44.44	55.23
AT1G48930.1	Thale cress	vacuole	54.76	55.02
EES15002	Sorghum	endoplasmic reticulum, extracellular	42.06	52.37
EER98860	Sorghum	golgi, mitochondrion, vacuole	44.13	51.29
KXG21209	Sorghum	cytosol	31.59	51.16
OQU76161	Sorghum	vacuole	35.4	50.57
EES06282	Sorghum	extracellular, vacuole	42.7	50.28
EES19222	Sorghum	vacuole	48.1	48.33
EES00659	Sorghum	vacuole	37.94	47.7
EES13257	Sorghum	extracellular	37.62	47.21
EES04405	Sorghum	plasma membrane, vacuole	38.25	46.89
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	47.94	46.18
EES07307	Sorghum	vacuole	36.51	45.63
EES05890	Sorghum	vacuole	35.4	44.87
EES12225	Sorghum	plastid	36.03	44.08
EES13778	Sorghum	extracellular	35.71	43.52
EER89549	Sorghum	mitochondrion	36.98	41.46
OQU89810	Sorghum	extracellular, plastid, vacuole	35.87	40.43
KXG31545	Sorghum	cytosol	32.54	37.68
EES07289	Sorghum	mitochondrion	41.75	34.7

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EntrezGene:8085858
UniProt:C5YAG9	InterPro:CBM_49	EnsemblPlants:EES13091	ProteinID:EES13091	ProteinID:EES13091.1	GO:GO:0000272
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798
GO:GO:0030245	GO:GO:0030246	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:IPR012341	PFAM:PF00759
PFAM:PF09478	ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF41	MetaCyc:PWY-6788	SMART:SM01063
EnsemblPlantsGene:SORBI_3006G265100	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A875B5	RefSeq:XP_002448763.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:59913313..59916103

Molecular Weight (calculated)

68258.1 Da

IEP (calculated)

6.259

GRAVY (calculated)

-0.212

Length

630 amino acids

Sequence
(BLAST)

001: MARLMTTATK TPATLAVAAS FLLLAAAAAS ASSAPFDYAG AFDKCLQFFE AQRSGKLPAD RRVHWRGDSA LTDGFSQGVD LVGGYYDSGD HVKFGFPMAY
101: AVTMLAWGVL EFEKEMVAAN NHQRALDAIR WGTNYFVKAH TEPNVLWVQV GDGDSDHLCW ERAEDMSTPR TAFKIDTNHP GSEVAAETAA ALAAASKAFR
201: PYDSMYADLL LVHAKQLFTF ADTFRGRYDD SLLSAKKFYP SGSGYEDELL WAAAWLHEAT GDEKYLQYVS RNAEDFGGIG MSMLEFSWDN KYAGLQVLLS
301: KAVLAHGGGG GEYADTLRQY QAKAEFFLCA CLQKNGGHNM KLTPGGLLHV DEWNNMQYVS SASFLLTVYA DYLSASRGAL RCPDGEVKPG EMVRFARSQA
401: DYVLGKNPRG MSYMVGYGSY FPTHVHHRGA SIPSVHAMGS VVGCMDGFDR FFNSKGADPN VLQGAVVGGP DANDGFVDDR CNYQQAEPTL AGNAPICGVF
501: ARLASEPADA SDNNRPVPSY SPPHDSSPSK GSPLEFVHTV SNSWTTNGVE YYRHVVTAKN TCGHPITYLK LHVKGLSGPI YGVSAATAKE KDTYELPAWL
601: TSLAAGEQLT IVYIQGGPAA KFSVVSYKTA

Best Arabidopsis Sequence Match ( AT1G48930.1 )
(BLAST)

001: MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNRKELS SSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE TAAALAAASL AFKPFNSSYS
201: ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG
301: GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG
401: MSYVVGYGPK YPIRVHHRGS SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL SGTAPLVGLF AKLYGGSLGS
501: YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK
601: TLRAGQAYDF VYVQGGPQAK VSVLSYN

Arabidopsis Description

AtGH9C1Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.