Factsheet for TraesCS2D01G557500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G120100.1	Barley	extracellular	94.33	94.48
TraesCS2B01G586600.1	Wheat	extracellular	94.0	94.46
TraesCS2A01G556300.1	Wheat	vacuole	97.41	93.18
Os04t0674800-01	Rice	extracellular	77.15	76.16
EES13091	Sorghum	vacuole	76.66	75.08
Zm00001d026605_P001	Maize	vacuole	76.01	75.04
GSMUA_Achr2P03770_001	Banana	vacuole	60.62	61.41
CDY60076	Canola	extracellular	22.2	56.61
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	55.59	55.77
KRH24186	Soybean	extracellular, vacuole	56.56	55.48
Bra032270.1-P	Field mustard	extracellular	53.97	54.68
KRH29156	Soybean	extracellular, vacuole	55.43	54.55
CDY60075	Canola	vacuole	54.3	53.51
CDY65179	Canola	extracellular	54.13	53.35
Bra018765.1-P	Field mustard	vacuole	53.65	53.04
Solyc02g014220.2.1	Tomato	extracellular	54.3	53.01
CDX93707	Canola	vacuole	53.48	52.88
PGSC0003DMT400051238	Potato	extracellular	53.97	52.69
CDY59895	Canola	cytosol, vacuole	43.27	52.66
AT1G48930.1	Thale cress	vacuole	53.32	52.47
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.08	51.42
TraesCS7D01G201000.1	Wheat	extracellular, vacuole	44.25	51.32
TraesCS7D01G146000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.3	50.68
TraesCS5D01G208900.1	Wheat	vacuole	43.76	50.37
TraesCS6D01G291800.1	Wheat	vacuole	43.6	49.45
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	36.63	48.71
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	38.57	48.57
TraesCS1D01G075100.1	Wheat	vacuole	38.57	48.57
TraesCS5D01G176800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	38.9	48.1
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	38.57	47.79
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	47.65	47.42
TraesCS6D01G089200.1	Wheat	golgi	32.9	46.99
TraesCS7D01G314400.1	Wheat	vacuole	37.6	46.96
TraesCS6D01G275900.1	Wheat	extracellular	37.76	46.79
TraesCS1D01G074800.1	Wheat	vacuole	35.01	46.55
TraesCS7D01G207600.1	Wheat	extracellular	37.44	46.29
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	48.46	45.79
TraesCS2D01G308500.1	Wheat	golgi	36.79	45.58
TraesCS1D01G090100.1	Wheat	extracellular	35.49	43.54
TraesCS5D01G323700.2	Wheat	vacuole	37.6	42.18
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	33.71	40.94

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	InterPro:CBM_49
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0030246	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341
PFAM:PF00759	PFAM:PF09478	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF41	SMART:SM01063
SUPFAM:SSF48208	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2D01G557500	EnsemblPlants:TraesCS2D01G557500.1	SEG:seg	:

Description

No Description!

Coordinates

chr2D:+:630424402..630426416

Molecular Weight (calculated)

66661.2 Da

IEP (calculated)

5.226

GRAVY (calculated)

-0.145

Length

617 amino acids

Sequence
(BLAST)

001: MARLAIASAA VALLVLLAAA SAEASPAWSD YAGAFDKSLQ FFEAQRSGKL PADRTVHWRG DSALTDGFSQ GVDLVGGYYD AGDHVKFGFP MAYAVTMLSW
101: GVLEFEKEMV AANSLNRALD AIRWGTNYFI KAHTEPNTLW VQVGDGDSDH LCWERAEDMS TPRTASKIDA SRPGSEVAAE TAAALAAAAK VFRHYDSMYA
201: DLLLMHAKQI FTFADTFRGR YDDSLQCAKK FYPSASGYQD ELLWGAAWLY EATGDEDYLD YVARNAEAFG GTGWAVREFS WDNKYAGVQV LLSKVLLAGG
301: GDGDYADTLK QFRAKAEFFM CACIQKNGGN NVRTTPGGLL YVADWNNMQY VSSSVFLLTV YADYLAESGD KLKCPDAEVA PAEIVAFARS QVDYVLGKNP
401: LSMSYMVGHG DKFPTHVHHR GASIPSVYAV NDTVGCMEGF DAYYNSKGAD PNVLVGALVG GPDGHDGFVD DRCNYQRAEP TLAAAAPMCG VFARLAASPA
501: AAGNSPGYQP PPGSLHIGGA PLEFVHAVTN SWEHNGVDHY RHTVTAKNTC GHPITYLKLR IEGLTGPIYG VSATHDKEMY GFPSWVTRLD AGEKLTIVYI
601: QEGGPAAKIA VAEYKTG

Best Arabidopsis Sequence Match ( AT1G48930.1 )
(BLAST)

001: MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNRKELS SSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE TAAALAAASL AFKPFNSSYS
201: ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG
301: GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG
401: MSYVVGYGPK YPIRVHHRGS SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL SGTAPLVGLF AKLYGGSLGS
501: YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK
601: TLRAGQAYDF VYVQGGPQAK VSVLSYN

Arabidopsis Description

AtGH9C1Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.