CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 6
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29156	Soybean	extracellular, vacuole	95.87	96.17
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	71.22	72.85
PGSC0003DMT400051238	Potato	extracellular	71.7	71.36
Solyc02g014220.2.1	Tomato	extracellular	70.59	70.25
CDY60076	Canola	extracellular	26.23	68.18
Bra032270.1-P	Field mustard	extracellular	65.5	67.65
CDY59895	Canola	cytosol, vacuole	54.21	67.26
Bra018765.1-P	Field mustard	vacuole	66.3	66.83
CDX93707	Canola	vacuole	66.3	66.83
CDY60075	Canola	vacuole	66.45	66.77
CDY65179	Canola	extracellular	66.45	66.77
AT1G48930.1	Thale cress	vacuole	65.98	66.19
GSMUA_Achr2P03770_001	Banana	vacuole	61.05	63.05
EES13091	Sorghum	vacuole	58.66	58.57
Zm00001d026605_P001	Maize	vacuole	57.55	57.92
Os04t0674800-01	Rice	extracellular	57.07	57.44
KRH14764	Soybean	cytosol, nucleus, vacuole	36.73	56.9
TraesCS2D01G557500.1	Wheat	extracellular	55.48	56.56
KRH73794	Soybean	vacuole	46.26	56.5
TraesCS2B01G586600.1	Wheat	extracellular	54.37	55.7
HORVU2Hr1G120100.1	Barley	extracellular	54.37	55.52
KRH73374	Soybean	vacuole	46.1	55.34
KRH14332	Soybean	vacuole	46.42	54.89
TraesCS2A01G556300.1	Wheat	vacuole	55.33	53.95
KRH60035	Soybean	nucleus	50.56	50.96
KRG89135	Soybean	extracellular	39.27	50.93
KRH41305	Soybean	nucleus	50.24	50.56
KRH41678	Soybean	nucleus	36.88	47.25
KRH60381	Soybean	nucleus	36.88	47.15
KRH62487	Soybean	extracellular, vacuole	35.93	46.69
KRH56424	Soybean	extracellular, vacuole	35.61	46.28
KRH60771	Soybean	extracellular, vacuole	35.77	45.82
KRG97785	Soybean	extracellular	36.57	45.63
KRH68213	Soybean	nucleus	36.25	45.6
KRH27886	Soybean	extracellular	37.04	45.6
KRH31855	Soybean	nucleus	36.57	45.54
KRH69273	Soybean	extracellular, vacuole	36.57	45.36
KRH51463	Soybean	extracellular	35.45	45.14
KRH52260	Soybean	extracellular, vacuole	34.5	44.93
KRH52262	Soybean	extracellular, vacuole	34.18	44.51
KRH29353	Soybean	extracellular, vacuole	35.45	44.42
KRG96467	Soybean	extracellular, vacuole	29.25	44.23
KRH23799	Soybean	extracellular, nucleus, vacuole	28.3	42.79
KRH55742	Soybean	vacuole	32.91	42.59
KRH39987	Soybean	extracellular, vacuole	33.39	42.51
KRH23800	Soybean	extracellular, vacuole	33.39	42.25

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100802420	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
UniProt:A0A0R0H131	EMBL:ACUP02007172	InterPro:CBM_49	EnsemblPlantsGene:GLYMA_12G027200	GO:GO:0000272	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245
GO:GO:0030246	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	EnsemblPlants:KRH24186	ProteinID:KRH24186
ProteinID:KRH24186.1	PFAM:PF00759	PFAM:PF09478	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF41
MetaCyc:PWY-6788	SMART:SM01063	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI0001B640D0	SEG:seg

Description

hypothetical protein

Coordinates

chr12:+:1961942..1966442

Molecular Weight (calculated)

69213.2 Da

IEP (calculated)

6.307

GRAVY (calculated)

-0.313

Length

629 amino acids

Sequence
(BLAST)

001: MKNLNISLCM LLVALVRLGG SAPSGFNYGD ALDKSLMFFE AQRSGKLPLP QRVKWRGDSG LQDGFQQGVD LVGGYYDAGD HVKFGLPMAY SVTMLAWGAI
101: EFNKEIADLN QMGQALWAIK WGTDYFIKAH TQPNVLWGQV GDGVSDHYCW ERAEDMTTSR GAYKIDEQHP GSDLAGETAA ALAAAAIAFR PYNSSYSNLL
201: LVHAKQLFTF ADRFRGLYDD SISSAQQFYT SSGYSDELLW AATWLHQATG DEYYIKYVVD NAMYMGGTGW AVKEFSWDNK YAGVQILLSK VLLEGKAGAY
301: AATLKQYQAK AEYFTCACLQ KNDGYNVQKT PGGLLYVRDW NNMQYVSSAA FLLAVYSNYL SATKSQLNCP DGQTQPQELL NFVKSQADYI LGKNPADVSY
401: LVGYGAKYPL HVHHRGASIA SIFALHYEVG CTQGFETWYN RAEPNPNVIC GGLVGGPDKN DDFSDERSNY EQTEPTISGS APLVGIFAKL QSLYGNHNIG
501: EGYNHNESPV PQQKTPSTNP GKATVSKTSS ESEGAAVEFL HSISSSWTVG GATYYRHRVI IKNTSSKPIS DLKLVIKDLS GSLWGLSPTE EKDTYELPQW
601: HKVLNPGSES IFVYVQGGPQ AKVSIKSLH

Best Arabidopsis Sequence Match ( AT1G48930.1 )
(BLAST)

001: MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNRKELS SSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE TAAALAAASL AFKPFNSSYS
201: ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG
301: GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG
401: MSYVVGYGPK YPIRVHHRGS SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL SGTAPLVGLF AKLYGGSLGS
501: YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK
601: TLRAGQAYDF VYVQGGPQAK VSVLSYN

Arabidopsis Description

AtGH9C1Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.