CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62487	Soybean	extracellular, vacuole	96.07	96.07
CDY66787	Canola	extracellular, plastid, vacuole	75.0	75.0
CDX96319	Canola	extracellular, plastid, vacuole	75.0	75.0
AT1G71380.1	Thale cress	extracellular	74.59	74.59
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	74.59	74.59
CDY12503	Canola	extracellular, vacuole	74.38	74.53
CDY25758	Canola	extracellular, vacuole	74.17	74.33
AT1G22880.1	Thale cress	extracellular	73.76	73.76
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	73.35	73.5
VIT_18s0089g00210.t01	Wine grape	extracellular, vacuole	74.59	73.08
Solyc11g040340.1.1	Tomato	extracellular, vacuole	70.87	71.61
PGSC0003DMT400021687	Potato	vacuole	71.28	71.58
Bra007982.1-P	Field mustard	extracellular	68.39	68.39
CDY03687	Canola	extracellular	68.18	68.18
CDY37939	Canola	extracellular, vacuole	67.77	67.91
CDY03686	Canola	extracellular	67.15	67.29
Bra007983.1-P	Field mustard	extracellular	66.74	66.87
CDY37936	Canola	extracellular	62.4	66.23
GSMUA_Achr6P07430_001	Banana	extracellular, vacuole	58.68	61.47
TraesCS6D01G089200.1	Wheat	golgi	54.55	61.11
Os04t0443300-00	Rice	vacuole	62.19	60.2
TraesCS6A01G093200.1	Wheat	golgi	61.57	59.96
HORVU2Hr1G077130.1	Barley	extracellular, vacuole	61.78	59.92
TraesCS2D01G308500.1	Wheat	golgi	61.36	59.64
TraesCS2B01G327200.1	Wheat	nucleus	62.4	59.45
TraesCS6B01G122000.1	Wheat	vacuole	50.21	59.27
Zm00001d025475_P001	Maize	extracellular, vacuole	61.36	58.35
TraesCS2A01G310200.1	Wheat	vacuole	60.54	58.02
KRG97785	Soybean	extracellular	59.3	56.94
EES12225	Sorghum	plastid	60.54	56.89
KRH60771	Soybean	extracellular, vacuole	57.23	56.42
KRH31855	Soybean	nucleus	58.26	55.84
KRH69273	Soybean	extracellular, vacuole	58.26	55.62
KRH68213	Soybean	nucleus	57.44	55.6
KRH51463	Soybean	extracellular	56.41	55.26
KRH41678	Soybean	nucleus	54.75	53.97
KRG96467	Soybean	extracellular, vacuole	46.28	53.85
KRH60381	Soybean	nucleus	53.93	53.05
KRH29353	Soybean	extracellular, vacuole	54.75	52.79
KRH23799	Soybean	extracellular, nucleus, vacuole	45.04	52.4
KRH39987	Soybean	extracellular, vacuole	52.69	51.62
KRH55742	Soybean	vacuole	51.65	51.44
KRH23800	Soybean	extracellular, vacuole	52.07	50.7
KRH27886	Soybean	extracellular	49.59	46.97
KRG89135	Soybean	extracellular	46.9	46.8
KRH73794	Soybean	vacuole	46.49	43.69
KRH52262	Soybean	extracellular, vacuole	42.98	43.06
KRH52260	Soybean	extracellular, vacuole	42.98	43.06
KRH14332	Soybean	vacuole	46.49	42.29
KRH14764	Soybean	cytosol, nucleus, vacuole	34.92	41.63
KRH73374	Soybean	vacuole	44.83	41.41
KRH60035	Soybean	nucleus	47.93	37.18
KRH41305	Soybean	nucleus	47.93	37.12
KRH24186	Soybean	extracellular, vacuole	46.28	35.61
KRH29156	Soybean	extracellular, vacuole	45.87	35.41

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100791156	MapMan:21.1.3.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
EMBL:ACUP02004115	EnsemblPlantsGene:GLYMA_06G323100	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	UniProt:I1KFW9
InterPro:IPR012341	EnsemblPlants:KRH56424	ProteinID:KRH56424	ProteinID:KRH56424.1	PFAM:PF00759	ScanProsite:PS00698
PANTHER:PTHR22298	PANTHER:PTHR22298:SF54	MetaCyc:PWY-6788	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI0002339463
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:51107552..51110880

Molecular Weight (calculated)

53867.8 Da

IEP (calculated)

8.856

GRAVY (calculated)

-0.261

Length

484 amino acids

Sequence
(BLAST)

001: MGNSLVFLLF LITLLFVGNV QCNPNYREAL AKSLLFFQGQ RSGRLPSDQQ IKWRSNSGLF DGRLANVDLS GGYYDAGDNV KFNFPMAYTT SMLSWATIEY
101: GKRMGPQIKE ARAAIRWATD YLLKCATSTP GRLYVGVGDP NVDHKCWERP EDMDTVRTVY WVSPNNPGSD VAAETAAALA AASIVFRRLD PTYSNKLLRT
201: AQQVYHFALQ YQGSYSHSLG SAVCPFYCSY SGFKDELLWG AAWLFRATNA VSYYNLVKSL GADDQPDIFS WDNKYAGAHV LLSRRALLNG DKNFDQYKQE
301: AENFMCKILP NSPSSSTQYT QGGLMYKLPE SNLQYVTSIT FLLTTYSKYM SAKKHTFNCG NVLVTPNTLR SIAKRQVDYI LGANPIRMSY MVGYGPYFPK
401: RIHHRGSSLP SIAAHPQSIG CDGGFNPFFH SMNPNPNILV GAIVGGPNQN DGFPDDRSDY SHSEPATYIN AAFVGPLAYF AGIR

Best Arabidopsis Sequence Match ( AT1G71380.1 )
(BLAST)

001: MTSLFFFVLL FSSLLISNGD ANPNYKEALS KSLLFFQGQR SGPLPRGQQI SWRASSGLSD GSAAHVDLTG GYYDAGDNVK FNLPMAFTTT MLSWSALEYG
101: KRMGPELENA RVNIRWATDY LLKCARATPG KLYVGVGDPN VDHKCWERPE DMDTPRTVYS VSASNPGSDV AAETAAALAA ASMVFRKVDS KYSRLLLATA
201: KDVMQFAIQY QGAYSDSLSS SVCPFYCSYS GYKDELMWGA SWLLRATNNP YYANFIKSLG GGDQPDIFSW DNKYAGAYVL LSRRALLNKD SNFEQYKQAA
301: ENFICKILPD SPSSSTQYTQ GGLMYKLPQS NLQYVTSITF LLTTYAKYMK ATKHTFNCGS SVIVPNALIS LSKRQVDYIL GDNPIKMSYM VGFSSNFPKR
401: IHHRASSLPS HALRSQSLGC NGGFQSFYTQ NPNPNILTGA IVGGPNQNDG YPDQRDDYSH AEPATYINAA FVGPLAYFAA GRST

Arabidopsis Description

CEL3Endoglucanase [Source:UniProtKB/TrEMBL;Acc:Q0V7W1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.