Factsheet for Solyc11g040340.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021687	Potato	vacuole	97.7	97.1
KRH56424	Soybean	extracellular, vacuole	71.61	70.87
VIT_18s0089g00210.t01	Wine grape	extracellular, vacuole	72.65	70.45
KRH62487	Soybean	extracellular, vacuole	70.77	70.04
CDY12503	Canola	extracellular, vacuole	69.94	69.36
CDY25758	Canola	extracellular, vacuole	69.94	69.36
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	69.52	68.94
AT1G22880.1	Thale cress	extracellular	69.1	68.39
AT1G71380.1	Thale cress	extracellular	68.27	67.56
CDX96319	Canola	extracellular, plastid, vacuole	67.85	67.15
CDY66787	Canola	extracellular, plastid, vacuole	67.64	66.94
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	67.43	66.74
Bra007982.1-P	Field mustard	extracellular	66.39	65.7
CDY03687	Canola	extracellular	66.18	65.5
CDY37939	Canola	extracellular, vacuole	65.14	64.6
CDY03686	Canola	extracellular	65.14	64.6
Bra007983.1-P	Field mustard	extracellular	64.72	64.18
CDY37936	Canola	extracellular	60.54	63.6
GSMUA_Achr6P07430_001	Banana	extracellular, vacuole	56.99	59.09
TraesCS6D01G089200.1	Wheat	golgi	52.61	58.33
Os04t0443300-00	Rice	vacuole	60.33	57.8
HORVU2Hr1G077130.1	Barley	extracellular, vacuole	60.13	57.72
TraesCS2D01G308500.1	Wheat	golgi	59.5	57.23
TraesCS2B01G327200.1	Wheat	nucleus	60.33	56.89
TraesCS6A01G093200.1	Wheat	golgi	58.87	56.74
TraesCS2A01G310200.1	Wheat	vacuole	59.08	56.04
Zm00001d025475_P001	Maize	extracellular, vacuole	59.29	55.8
TraesCS6B01G122000.1	Wheat	vacuole	47.6	55.61
Solyc08g083210.2.1	Tomato	extracellular, vacuole	57.2	55.13
EES12225	Sorghum	plastid	58.66	54.56
Solyc09g010210.2.1	Tomato	plastid	53.65	52.56
Solyc09g075360.2.1	Tomato	plastid	55.74	52.35
Solyc01g110340.2.1	Tomato	extracellular, vacuole	52.82	51.01
Solyc03g083820.1.1	Tomato	plastid	51.98	50.0
Solyc08g081620.2.1	Tomato	extracellular	50.1	47.9
Solyc05g052530.1.1	Tomato	extracellular	45.09	44.44
Solyc06g066120.2.1	Tomato	extracellular, vacuole	44.68	44.03
Solyc07g049300.2.1	Tomato	extracellular, vacuole	45.3	43.14
Solyc07g064870.2.1	Tomato	mitochondrion	44.05	39.59
Solyc08g082250.2.1	Tomato	extracellular	48.23	36.96
Solyc02g014220.2.1	Tomato	extracellular	45.09	34.18
Solyc12g055970.1.1	Tomato	cytosol, nucleus	25.68	26.62

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:21.1.3.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0000272
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	UniProt:O04972	PFAM:PF00759
ScanProsite:PS00592	ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF54	SUPFAM:SSF48208	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc11g040340.1	EnsemblPlants:Solyc11g040340.1.1	UniParc:UPI00000A057D	EMBL:Y11268	SEG:seg	:

Description

Endoglucanase [Source:UniProtKB/TrEMBL;Acc:O04972]

Coordinates

chr11:+:37862898..37865065

Molecular Weight (calculated)

53437.2 Da

IEP (calculated)

8.649

GRAVY (calculated)

-0.303

Length

479 amino acids

Sequence
(BLAST)

001: MKVCVCLILF FSLGTAQFDY RDALEKSILF FEGQRSGKLP PNQRLSWRGN SGLQDGSLAK VDLSGGYYDA GDNVKFNFPM AYTTTMLSWN TLEYGKRMGA
101: QLQHARAAIR WATDYFLKCA NAAPNKLFVG VGDPNADHKC WERPEDMDTI RSVYYVSPSN PGSDVAGEMA AALAAASLVF RSVDPVYSKK LLGNAVKVFR
201: FAVQYRGSYS DSLGSAACPF YCSYSGYKDE LYWGAAWLLR ATNDISYLNL INTLGANDVP DLFSWDNKYA GAHVLMSRRS VVGNDNRFDS FKQRAEDFVC
301: KVLPNSPYTS TQYTKGGLLY KLPEENLQYV TSITSLLTTY AKYMATKKHT FNCGSLVVTE KTIRNFAKRQ VDYILGNNPM KMSYMVGYGS NYPRRIHHRG
401: SSLPSLAMHP QSFGCEAGFQ PFYYTANPNP NILVGAIIGG PNQNDFFPDE RTDYSHSEPA TYINAAIVGP LAYFDSSKH

Best Arabidopsis Sequence Match ( AT1G22880.1 )
(BLAST)

001: MASPFFFVFL LSALSLENTY ASPNYREALS KSLLFFQGQR SGRLPSDQQL SWRSSSGLSD GSSAHVDLTG GYYDAGDNVK FNFPMAFTTT MLSWSSLEYG
101: KKMGPELQNS RVAIRWATDY LLKCARATPG KLYVGVGDPN GDHKCWERPE DMDTPRTVYS VSPSNPGSDV AAETAAALAA SSMVFRKVDP KYSRLLLATA
201: KKVMQFAIQY RGAYSNSLSS SVCPFYCSYS GYKDELLWGA AWLHRATNDP YYTNFIKSLG GGDQPDIFSW DNKYAGAYVL LSRRAVLNKD NNFELYKQAA
301: ENFMCKILPN SPSSSTKYTK GGLMYKLPQS NLQYVTSITF LLTTYAKYMK STKQTFNCGN SLIVPNALIN LSKRQVDYVL GVNPMKMSYM VGFSSNFPKR
401: IHHRGSSLPS RAVRSNSLGC NGGFQSFRTQ NPNPNILTGA IVGGPNQNDE YPDQRDDYTR SEPATYINAA FVGPLAYFAA SRSP

Arabidopsis Description

CEL5Endoglucanase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q2V4L8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.