Factsheet for Solyc03g083820.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072087	Potato	golgi, vacuole	83.13	96.28
KRH39987	Soybean	extracellular, vacuole	61.04	61.54
KRH23799	Soybean	extracellular, nucleus, vacuole	50.8	60.82
KRH23800	Soybean	extracellular, vacuole	60.04	60.16
KRH55742	Soybean	vacuole	57.83	59.26
VIT_16s0022g00750.t01	Wine grape	extracellular, vacuole	58.23	58.12
Solyc09g010210.2.1	Tomato	plastid	55.42	56.44
GSMUA_Achr11P...	Banana	cytosol	53.61	54.49
GSMUA_Achr11P...	Banana	vacuole	54.22	54.0
Solyc11g040340.1.1	Tomato	extracellular, vacuole	50.0	51.98
Solyc08g083210.2.1	Tomato	extracellular, vacuole	50.6	50.7
Solyc09g075360.2.1	Tomato	plastid	51.41	50.2
Solyc01g110340.2.1	Tomato	extracellular, vacuole	49.2	49.4
Solyc08g081620.2.1	Tomato	extracellular	45.98	45.71
Solyc07g049300.2.1	Tomato	extracellular, vacuole	45.58	45.13
Solyc05g052530.1.1	Tomato	extracellular	42.17	43.21
Solyc06g066120.2.1	Tomato	extracellular, vacuole	41.97	43.0
Solyc07g064870.2.1	Tomato	mitochondrion	44.98	42.03
Solyc08g082250.2.1	Tomato	extracellular	44.18	35.2
Solyc02g014220.2.1	Tomato	extracellular	42.57	33.54
Solyc12g055970.1.1	Tomato	cytosol, nucleus	26.1	28.14

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0000272
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	UniProt:K4BIF7	PFAM:PF00759	ScanProsite:PS00592
PANTHER:PTHR22298	PANTHER:PTHR22298:SF45	SUPFAM:SSF48208	EnsemblPlantsGene:Solyc03g083820.1	EnsemblPlants:Solyc03g083820.1.1	TMHMM:TMhelix
UniParc:UPI0002768CF6	SEG:seg	:	:	:	:

Description

Endoglucanase [Source:UniProtKB/TrEMBL;Acc:K4BIF7]

Coordinates

chr3:-:53720256..53722483

Molecular Weight (calculated)

55431.4 Da

IEP (calculated)

8.283

GRAVY (calculated)

-0.136

Length

498 amino acids

Sequence
(BLAST)

001: MIIGSGKLSL NCLVLKIIAA AFVCLTSTVV AINVPNPNYA DALTKSILFF EGQRSGKLPP NQRMTWRKDS ALLDGAEKGV DLVGGYYDAG DNVKFHFPMA
101: FTSTMLAWSV EQFKNSMGPD LQHAMEAIRW STDYFLKATN IPNVVYAQVG NAENDHNCWE RPEDMDTPRT AFAVTAQAPG SEVSAEIAAA LAAASVVFKR
201: TDPAYSKLLV NRAVQVFEFA DKYRGSYNDH LGSWVCPFYC DYNGYKDELL WAAAWLLKAT RKPMYWIYVK QNIINFKSDM ESSLSEFGWD AKHAGINVLI
301: SKFVLDNPSN ANPFLPYADT FVCSVFPESP TNTVRYTPGG LMYKSGICNM QNPTALSFLL LTYARYMKSR VIRCGNIDVT QKMLIRFARS QVNYILGINP
401: MNMSYMVGFG TKFPQRIHHR GASLPSINQH PEKMGCKEGT PYFLSENPNP NLHIGAVVGG PDIKDYFVDS RPNAAQSEPT TYVNAPLVGL LAYFKAHP

Best Arabidopsis Sequence Match ( AT1G70710.1 )
(BLAST)

001: MARKSLIFPV ILLAVLLFSP PIYSAGHDYR DALRKSILFF EGQRSGKLPP DQRLKWRRDS ALRDGSSAGV DLSGGYYDAG DNIKFGFPMA FTTTMLSWSI
101: IDFGKTMGPE LRNAVKAVKW GTDYLLKATA IPGVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDRAHPG SDVAGETAAA LAAASIVFRK RDPAYSRLLL
201: DRATRVFAFA NRYRGAYSNS LYHAVCPFYC DFNGYQDELL WGAAWLHKAS RKRAYREFIV KNEVILKAGD TINEFGWDNK HAGINVLISK EVLMGKAEYF
301: ESFKQNADGF ICSILPGISH PQVQYSRGGL LVKTGGSNMQ HVTSLSFLLL AYSNYLSHAK KVVPCGELTA SPSLLRQIAK RQVDYILGDN PMGLSYMVGY
401: GQKFPRRIHH RGSSVPSVSA HPSHIGCKEG SRYFLSPNPN PNLLVGAVVG GPNVTDAFPD SRPYFQQSEP TTYINAPLVG LLGYFSAHST WR

Arabidopsis Description

CEL1Endoglucanase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAC1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.