CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 2
mitochondrion 3
vacuole 3
extracellular 4
plasma membrane 3
golgi 2
endoplasmic reticulum 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60771	Soybean	extracellular, vacuole	80.68	82.48
KRH51463	Soybean	extracellular	80.88	82.19
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	75.7	76.77
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	73.9	74.95
Solyc01g110340.2.1	Tomato	extracellular, vacuole	73.51	74.4
CDY42599	Canola	cytosol	68.92	72.84
Bra011881.1-P	Field mustard	cytosol	68.53	72.42
CDY41955	Canola	extracellular, vacuole	69.72	70.71
AT4G39010.1	Thale cress	extracellular, vacuole	69.32	70.02
GSMUA_Achr1P07760_001	Banana	vacuole	67.53	67.66
GSMUA_Achr2P03400_001	Banana	extracellular	66.93	67.33
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	57.57	65.68
TraesCS5A01G317400.1	Wheat	plastid	66.14	65.1
TraesCS5B01G318000.1	Wheat	vacuole	65.74	64.33
HORVU5Hr1G081200.5	Barley	vacuole	65.74	64.08
Os09t0530200-01	Rice	mitochondrion	64.74	63.11
TraesCS5D01G323700.2	Wheat	vacuole	66.14	60.36
Zm00001d021280_P004	Maize	vacuole	66.14	60.36
OQU89810	Sorghum	extracellular, plastid, vacuole	66.33	59.57
KRH68213	Soybean	nucleus	57.37	57.6
KRH41678	Soybean	nucleus	55.98	57.23
KRH60381	Soybean	nucleus	55.98	57.11
Bra011882.1-P	Field mustard	extracellular	55.78	56.91
Bra033592.1-P	Field mustard	extracellular	55.78	56.91
CDY22399	Canola	extracellular	55.78	56.91
AT4G39000.1	Thale cress	extracellular, vacuole	55.78	56.8
CDY41954	Canola	vacuole	52.79	56.75
KRH31855	Soybean	nucleus	56.97	56.63
CDX72723	Canola	extracellular	55.38	56.5
KRH69273	Soybean	extracellular, vacuole	56.77	56.21
CDY42597	Canola	extracellular	52.19	56.1
KRG96467	Soybean	extracellular, vacuole	46.41	56.01
CDY22400	Canola	extracellular, vacuole	51.59	55.7
KRH39987	Soybean	extracellular, vacuole	54.78	55.67
Bra033591.1-P	Field mustard	extracellular, vacuole	53.78	55.1
KRH62487	Soybean	extracellular, vacuole	52.79	54.75
KRH56424	Soybean	extracellular, vacuole	52.79	54.75
KRH23800	Soybean	extracellular, vacuole	53.98	54.53
KRH23799	Soybean	extracellular, nucleus, vacuole	45.02	54.33
KRG97785	Soybean	extracellular	53.19	52.98
KRH55742	Soybean	vacuole	50.4	52.06
KRH27886	Soybean	extracellular	47.01	46.18
KRG89135	Soybean	extracellular	43.23	44.74
KRH14764	Soybean	cytosol, nucleus, vacuole	34.86	43.1
KRH52260	Soybean	extracellular, vacuole	41.04	42.65
KRH73374	Soybean	vacuole	44.42	42.56
KRH52262	Soybean	extracellular, vacuole	40.84	42.44
KRH73794	Soybean	vacuole	42.63	41.55
KRH14332	Soybean	vacuole	43.63	41.17
KRH60035	Soybean	nucleus	46.22	37.18
KRH41305	Soybean	nucleus	46.02	36.96
KRH24186	Soybean	extracellular, vacuole	44.42	35.45
KRH29156	Soybean	extracellular, vacuole	43.43	34.77

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100101849	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
EMBL:ACUP02006798	EnsemblPlantsGene:GLYMA_11G111500	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:IPR012341
UniProt:K7LP57	EnsemblPlants:KRH29353	ProteinID:KRH29353	ProteinID:KRH29353.1	PFAM:PF00759	ScanProsite:PS00698
PANTHER:PTHR22298	PANTHER:PTHR22298:SF29	MetaCyc:PWY-6788	SUPFAM:SSF48208	UniParc:UPI000233CB37	SEG:seg

Description

hypothetical protein

Coordinates

chr11:-:8502262..8509337

Molecular Weight (calculated)

55814.9 Da

IEP (calculated)

4.971

GRAVY (calculated)

-0.388

Length

502 amino acids

Sequence
(BLAST)

001: MHQSMKMKKV LRSLFQIAVF HVLLKPKAGL GSSHDYGDAL SKAIIFFEGQ RSGFLPEDQR VSWRGKSGLS DGWNYNTDLT GGYYDAGDNV KFGFPMAFTT
101: TMLAWSVLEF GDVMPPNELR NALVAIRWAT DYLLKTVSQP NRIFVQVGDP NSDHECWERP EDMDTARTTY AVDAPNAASD VAGETAAALA AASMAFRSSD
201: PGYSETLRRN AITAFQFADN YRGAYSDNDN VKYNACPYYC DFDGYQDELL WGAAWLRRAT QDDNFLNYIQ TNGKTLGADD NINEFGWDNK HAGLNVLVSK
301: EVIEGNMYSL ESYKSSAESF ICTLIPESPS SHIEYTPGGL VYRPGGSNLQ HATSIAFLEL VYANYLTHAS QAINCGNVYV SAQTLRQHAK RQVDYILGDN
401: PMGLSYMVGY SNYYPQRIHH RGSSLPSIKD HPQFIACKEG SIYYNSTNPN PNVLVGAIVG GPDENDDYVD DRVDFRKSEP TTYINAPFVG VLAYFAANPN
501: FS

Best Arabidopsis Sequence Match ( AT4G39010.1 )
(BLAST)

001: MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
101: VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
201: TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
301: NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
401: YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS

Arabidopsis Description

AtGH9B18Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.