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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 6
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41954 Canola vacuole 94.65 94.65
CDY22399 Canola extracellular 81.58 77.44
CDX72723 Canola extracellular 81.16 77.03
AT4G39000.1 Thale cress extracellular, vacuole 77.52 73.43
CDY22400 Canola extracellular, vacuole 68.09 68.39
CDY42599 Canola cytosol 57.6 56.63
CDY41955 Canola extracellular, vacuole 58.24 54.95
Solyc01g110340.2.1 Tomato extracellular, vacuole 56.96 53.63
PGSC0003DMT400008105 Potato endoplasmic reticulum, extracellular, vacuole 56.32 53.13
KRH60771 Soybean extracellular, vacuole 55.46 52.75
KRH51463 Soybean extracellular 55.46 52.43
VIT_03s0038g00630.t01 Wine grape extracellular, vacuole 55.46 52.32
KRH29353 Soybean extracellular, vacuole 56.1 52.19
GSMUA_Achr1P07760_001 Banana vacuole 54.39 50.7
GSMUA_Achr9P20920_001 Banana extracellular, vacuole 47.32 50.23
GSMUA_Achr2P03400_001 Banana extracellular 52.46 49.1
CDY04737 Canola extracellular, vacuole 51.61 48.98
CDY23486 Canola extracellular 50.96 48.77
CDX68334 Canola endoplasmic reticulum 50.96 48.77
CDY21424 Canola extracellular 51.39 48.58
CDX96271 Canola extracellular, vacuole 51.18 47.9
CDY11552 Canola endoplasmic reticulum, extracellular 51.18 47.9
CDY32480 Canola extracellular, vacuole 52.25 47.66
TraesCS5A01G317400.1 Wheat plastid 51.82 47.45
HORVU5Hr1G081200.5 Barley vacuole 51.82 46.99
Os09t0530200-01 Rice mitochondrion 51.82 46.99
TraesCS5B01G318000.1 Wheat vacuole 51.61 46.98
CDY37459 Canola endoplasmic reticulum, extracellular 50.75 46.47
CDX97262 Canola vacuole 50.32 45.72
CDY12503 Canola extracellular, vacuole 46.9 45.34
Zm00001d021280_P004 Maize vacuole 53.1 45.09
CDY22043 Canola extracellular, vacuole 49.89 44.98
CDY52780 Canola extracellular, vacuole 49.89 44.98
CDY03686 Canola extracellular 46.47 44.93
CDY25758 Canola extracellular, vacuole 46.47 44.93
CDY66787 Canola extracellular, plastid, vacuole 45.82 44.21
OQU89810 Sorghum extracellular, plastid, vacuole 52.89 44.19
TraesCS5D01G323700.2 Wheat vacuole 52.03 44.18
CDY03687 Canola extracellular 45.18 43.59
CDX96319 Canola extracellular, plastid, vacuole 45.18 43.59
CDY10945 Canola extracellular, vacuole 44.75 43.54
CDY37939 Canola extracellular, vacuole 44.97 43.48
CDY37936 Canola extracellular 42.18 43.2
CDX74666 Canola vacuole 45.18 43.15
CDX94202 Canola vacuole 44.33 43.12
CDX83426 Canola extracellular, plastid, vacuole 44.11 43.01
CDY44116 Canola extracellular 44.11 42.92
CDY10895 Canola extracellular 43.9 42.71
CDY47675 Canola vacuole 44.33 42.33
CDX74667 Canola extracellular, vacuole 39.19 42.26
CDX74668 Canola extracellular 44.54 42.19
CDX74664 Canola extracellular, vacuole 44.11 42.13
CDY47674 Canola extracellular, vacuole 44.11 41.78
CDY60076 Canola extracellular 21.63 41.74
CDX95605 Canola extracellular, vacuole 43.9 41.08
CDY17123 Canola vacuole 45.18 40.42
CDY19428 Canola vacuole 44.75 40.04
CDY19174 Canola vacuole 45.18 40.04
CDY21221 Canola golgi, vacuole 41.33 39.71
CDY30943 Canola golgi, vacuole 41.33 39.71
CDY01915 Canola cytosol 30.62 39.39
CDY23776 Canola vacuole 44.33 39.35
CDX87948 Canola extracellular, vacuole 40.9 39.3
CDY12319 Canola cytosol, extracellular, vacuole 40.9 39.3
CDY47849 Canola extracellular, vacuole 45.61 34.35
CDY34422 Canola endoplasmic reticulum, extracellular, vacuole 45.4 34.19
CDY46529 Canola extracellular, vacuole 45.4 34.14
CDY05130 Canola extracellular, vacuole 45.61 34.03
CDX90780 Canola endoplasmic reticulum, extracellular 45.4 33.87
CDY65179 Canola extracellular 43.68 32.59
CDY60075 Canola vacuole 43.68 32.59
CDX93707 Canola vacuole 43.25 32.37
CDY59895 Canola cytosol, vacuole 32.12 29.59
CDY08373 Canola cytosol, extracellular, mitochondrion, nucleus 22.91 25.36
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:A0A078HXN0
UniProt:A0A078HXN0EnsemblPlants:CDY42597ProteinID:CDY42597ProteinID:CDY42597.1GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00075101001
InterPro:Glyco_hydro_9InterPro:IPR012341PFAM:PF00759PANTHER:PTHR22298PANTHER:PTHR22298:SF29MetaCyc:PWY-6788
SUPFAM:SSF48208SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDD0B2SEG:seg:
Description
BnaC01g00090DBnaC01g00090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXN0]
Coordinates
chrLK032530:-:26413..28709
Molecular Weight (calculated)
52030.8 Da
IEP (calculated)
6.006
GRAVY (calculated)
-0.146
Length
467 amino acids
Sequence
(BLAST)
001: MKASILILTV FVLLLLLPTV IPHDYSDALY KSILFFEGQR SGRLPREQRM LWRSDSALKD GENLNTDLVG GYYDAGDNVK FHFPMAFTAT MLAWSSIDFS
101: CYMSENDFSH NLVNIKWATD YLLKTVSQLP HRIFVQVGEA QPDHDCWERP EDMDTPRTAF AIDAPGPASD LAGEITAALA AASIAFKQSR PIYSQLLLSK
201: AIQTFRNNGY KDELLWGAAW LRRATGSDYY LEYLVNNRET FGVDYNYLDF GWDSKFGGAD VLIAKEVFEK NVSALTPFKD IAEKMMCAVF PETAGPHMSY
301: TPGGLLYKPV GSQLQSTAAM SFVILTYADY LSKSSQQLSC GNLKFQSDSL RRIVKRQVDY ILGDNPMHVS YMVGYGDQYP RQVHHRGSSI PSVKVQSTAF
401: GCILGWNIFH SDNPNPNILV GAVVGGPNVD DTFVGKRTNA TDTEPTTYIN APLVGVFAYF KSNPNVA
Best Arabidopsis Sequence Match ( AT4G39000.1 )
(BLAST)
001: MKASIYLVTV FILLLLLLPT AIPHDYSDAL RKSILFFEGQ RSGRLPKQQR MAWRRNSALN DGKNLKTDLV GGYYDAGDNV KFHFPMAFTA TMLAWSSVDF
101: GRYMSQHDFR HNLVAVKWAT DYLLKTVSQL PNRIFVHVGE VQPDHDCWER PEDMDTPRTA FALDAPYPAS DLAGEIAAAL AAASIAFKQA NPKYSAILLN
201: KAVQTFQYAD SHRGSYTDNP GIKQAVCPFY CSVNGYKDEL LWGAAWLRRA TGEDSYLRYL VDNGQAFGES SNYFEFGWDN KVGGVNVLVA KEVLQNNVTA
301: IAAYKDTAEK MMCSFLPETN GPHMSYTPGG LIYKPGSTQL QNTAALSFLL LTYADYLSTS SQQLNCGNLK FQPDSLRRIV KRQVDYVLGD NPMKLSYMIG
401: YGERYPGLIH HRGSSIPSVT VHPAAFGCIA GWNIFSSPNP NPNILIGAVI GGPDVDDRFI GGRTNASETE PTTYINAPFV GVFAYFKSNP NFS
Arabidopsis Description
AtGH9B17Endoglucanase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY58]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.