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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027735.1-P Field mustard extracellular, vacuole 99.03 99.03
CDY47849 Canola extracellular, vacuole 98.71 98.71
CDY46529 Canola extracellular, vacuole 98.39 98.23
CDY08373 Canola cytosol, extracellular, mitochondrion, nucleus 65.32 95.97
KRH60035 Soybean nucleus 79.84 79.33
KRH41305 Soybean nucleus 79.68 79.04
VIT_02s0025g01380.t01 Wine grape extracellular, vacuole 77.26 76.15
CDX90780 Canola endoplasmic reticulum, extracellular 75.81 75.08
CDY05130 Canola extracellular, vacuole 75.16 74.44
Solyc08g082250.2.1 Tomato extracellular 74.19 73.6
PGSC0003DMT400032028 Potato endoplasmic reticulum, extracellular, vacuole 73.71 73.12
PGSC0003DMT400012809 Potato extracellular, vacuole 63.39 72.78
GSMUA_Achr4P08520_001 Banana endoplasmic reticulum, extracellular, vacuole 65.65 69.57
Solyc12g055970.1.1 Tomato cytosol, nucleus 50.32 67.53
Os01t0220100-01 Rice extracellular, vacuole 62.9 60.94
EES19222 Sorghum vacuole 61.13 60.45
Zm00001d010446_P001 Maize vacuole 60.65 60.35
TraesCS1D01G397400.1 Wheat extracellular, vacuole 60.32 60.32
TraesCS4B01G104500.1 Wheat extracellular, vacuole 60.32 60.32
TraesCS1A01G389300.1 Wheat extracellular, vacuole 60.16 60.06
TraesCS3A01G144600.1 Wheat extracellular, vacuole 60.81 59.84
HORVU1Hr1G085830.2 Barley vacuole 60.16 59.78
HORVU3Hr1G029470.2 Barley endoplasmic reticulum, extracellular, vacuole 60.0 59.71
Os05t0212300-01 Rice extracellular, vacuole 60.32 59.46
CDY17123 Canola vacuole 49.35 58.62
Os01t0219600-00 Rice mitochondrion 60.48 58.59
CDY19428 Canola vacuole 49.03 58.24
CDY19174 Canola vacuole 49.19 57.87
Zm00001d008952_P001 Maize extracellular 60.0 57.67
CDY23776 Canola vacuole 48.87 57.6
TraesCS3D01G153400.1 Wheat extracellular, mitochondrion, plastid, vacuole 60.65 57.58
EES00050 Sorghum extracellular, mitochondrion, plastid, vacuole 59.52 56.42
CDY60076 Canola extracellular 21.77 55.79
CDX74667 Canola extracellular, vacuole 36.13 51.73
CDX74666 Canola vacuole 40.0 50.72
CDX74664 Canola extracellular, vacuole 39.52 50.1
CDY21424 Canola extracellular 39.84 50.0
CDX74668 Canola extracellular 39.68 49.9
CDY47675 Canola vacuole 39.19 49.69
CDY04737 Canola extracellular, vacuole 39.35 49.59
CDY47674 Canola extracellular, vacuole 39.19 49.29
CDX68334 Canola endoplasmic reticulum 38.71 49.18
CDY23486 Canola extracellular 38.71 49.18
CDY10945 Canola extracellular, vacuole 38.06 49.17
CDX94202 Canola vacuole 38.06 49.17
CDY65179 Canola extracellular 49.52 49.04
CDY60075 Canola vacuole 49.52 49.04
CDX83426 Canola extracellular, plastid, vacuole 37.74 48.85
CDY11552 Canola endoplasmic reticulum, extracellular 39.19 48.7
CDY32480 Canola extracellular, vacuole 40.16 48.63
CDY44116 Canola extracellular 37.58 48.54
CDY10895 Canola extracellular 37.58 48.54
CDX96271 Canola extracellular, vacuole 39.03 48.5
CDX93707 Canola vacuole 48.71 48.4
CDX97262 Canola vacuole 40.0 48.25
CDY12503 Canola extracellular, vacuole 37.58 48.24
CDY59895 Canola cytosol, vacuole 39.35 48.13
CDY25758 Canola extracellular, vacuole 37.42 48.03
CDY37459 Canola endoplasmic reticulum, extracellular 39.35 47.84
CDX96319 Canola extracellular, plastid, vacuole 37.26 47.73
CDY66787 Canola extracellular, plastid, vacuole 37.26 47.73
CDY22043 Canola extracellular, vacuole 39.68 47.49
CDY52780 Canola extracellular, vacuole 39.68 47.49
CDX87948 Canola extracellular, vacuole 36.94 47.12
CDY12319 Canola cytosol, extracellular, vacuole 36.94 47.12
CDX95605 Canola extracellular, vacuole 37.74 46.89
CDY21221 Canola golgi, vacuole 36.29 46.3
CDY30943 Canola golgi, vacuole 36.29 46.3
CDY37936 Canola extracellular 34.03 46.27
CDY03686 Canola extracellular 35.81 45.96
CDY41954 Canola vacuole 34.35 45.61
CDY42599 Canola cytosol 34.84 45.47
CDY42597 Canola extracellular 34.19 45.4
CDY03687 Canola extracellular 35.32 45.25
KXG31545 Sorghum cytosol 39.68 45.22
CDY37939 Canola extracellular, vacuole 35.16 45.13
CDY22399 Canola extracellular 35.81 45.12
CDX72723 Canola extracellular 35.48 44.72
CDY22400 Canola extracellular, vacuole 33.06 44.09
CDY41955 Canola extracellular, vacuole 35.16 44.04
CDY01915 Canola cytosol 24.84 42.42
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:A0A078H9S8
UniProt:A0A078H9S8InterPro:CBM_49EnsemblPlants:CDY34422ProteinID:CDY34422ProteinID:CDY34422.1GO:GO:0000272
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0008810GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0016798
GO:GO:0030245GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00056494001InterPro:Glyco_hydro_9InterPro:Glyco_hydro_9_Asp/Glu_ASInterPro:Glyco_hydro_9_His_AS
InterPro:IPR012341PFAM:PF00759PFAM:PF09478ScanProsite:PS00592ScanProsite:PS00698PANTHER:PTHR22298
PANTHER:PTHR22298:SF19MetaCyc:PWY-6788SMART:SM01063SUPFAM:SSF48208SignalP:SignalP-noTMUniParc:UPI0004EDC853
SEG:seg:::::
Description
BnaA09g11640DEndoglucanase [Source:UniProtKB/TrEMBL;Acc:A0A078H9S8]
Coordinates
chrLK032333:+:411748..415677
Molecular Weight (calculated)
68405.9 Da
IEP (calculated)
9.906
GRAVY (calculated)
-0.285
Length
620 amino acids
Sequence
(BLAST)
001: MEKFASVAAL LLLLSFPVAF SGHDYGQALS KSLLFFEAQR SGVLPRNQRV TWRSHSGLTD GKSSGVNLVG GYYDAGDNVK FGLPMAFTVT MMAWSVIEYG
101: NQLAANGELG HSIDAIKWGT DYFIKAHPEP NVLYGEVGDG NTDHYCWQRP EEMTTDRKAY RIDPSNPGSD LAGETAAAMA AASIVFRRSN PAYSRLLLTH
201: AYQLFDFADK YRGKYDSSIT VARKYYGSVS GYNDELLWAA AWLYQASNNQ FYLDYLGRNG DSMGGTGWSM TEFGWDVKYA GVQTLVAKFL MQGKAGRHTA
301: VFQKFQQKAD FFMCSLLGKG SRNIQKTPGG LIFRQRWNNM QFVTSASFLT TVYSDYLTSS RSNLRCSAGN VAPSQLLSFA KSQVDYILGD NPRATSYMVG
401: YGNNFPQRVH HRGSSIVSYK VDRSFVTCRG GYATWFSRKG SDPNLLTGAI VGGPDAYDNF ADRRDNYEQT EPATYNNAPL LGVLARLSSG HSGYSQLLPA
501: VPAPVVVRRP MPIRKPRVTS PVRASGPVAI VQKMTGSWVS KGRTYYRYST TVINKSPRAL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLQSGKSLE
601: FVYIHSTSPA NVAVSSYTLA
Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)
001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA
Arabidopsis Description
AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.