Factsheet for TraesCS3A01G144600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	93.97	90.66
HORVU3Hr1G029470.2	Barley	endoplasmic reticulum, extracellular, vacuole	87.94	88.92
Os01t0220100-01	Rice	extracellular, vacuole	70.48	69.38
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	70.95	68.35
Zm00001d008952_P001	Maize	extracellular	69.52	67.91
Os01t0219600-00	Rice	mitochondrion	68.25	67.19
TraesCS1A01G389300.1	Wheat	extracellular, vacuole	64.44	65.38
CDY47849	Canola	extracellular, vacuole	60.0	60.97
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	60.0	60.87
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	56.51	60.85
CDY34422	Canola	endoplasmic reticulum, extracellular, vacuole	59.84	60.81
CDY46529	Canola	extracellular, vacuole	59.68	60.55
Bra027735.1-P	Field mustard	extracellular, vacuole	59.52	60.48
PGSC0003DMT400032028	Potato	endoplasmic reticulum, extracellular, vacuole	59.37	59.84
Solyc08g082250.2.1	Tomato	extracellular	59.21	59.68
VIT_02s0025g01380.t01	Wine grape	extracellular, vacuole	59.37	59.46
KRH41305	Soybean	nucleus	58.25	58.72
PGSC0003DMT400012809	Potato	extracellular, vacuole	50.32	58.7
KRH60035	Soybean	nucleus	58.1	58.65
CDY05130	Canola	extracellular, vacuole	57.3	57.67
AT4G11050.1	Thale cress	vacuole	57.14	57.51
CDX90780	Canola	endoplasmic reticulum, extracellular	57.14	57.51
KXG31545	Sorghum	cytosol	49.21	56.99
TraesCS6A01G312400.1	Wheat	vacuole	47.94	56.03
TraesCS7A01G144400.1	Wheat	cytosol, vacuole	37.14	55.98
TraesCS7A01G144700.1	Wheat	vacuole	45.24	55.02
TraesCS7A01G144500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.92	54.95
TraesCS6A01G122100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.92	53.5
CDY08373	Canola	cytosol, extracellular, mitochondrion, nucleus	35.71	53.32
TraesCS5A01G202600.1	Wheat	vacuole	44.76	52.61
Solyc12g055970.1.1	Tomato	cytosol, nucleus	37.62	51.3
TraesCS1A01G072100.1	Wheat	nucleus	39.21	50.41
TraesCS7A01G197900.1	Wheat	extracellular, vacuole	46.51	50.26
TraesCS1A01G072300.1	Wheat	vacuole	39.05	49.8
TraesCS7A01G204500.1	Wheat	extracellular	37.78	47.32
TraesCS7A01G317700.1	Wheat	extracellular	36.98	47.17
TraesCS6A01G295300.1	Wheat	extracellular	36.98	46.98
TraesCS5A01G172100.1	Wheat	extracellular, vacuole	36.67	46.29
TraesCS2A01G556300.1	Wheat	vacuole	47.14	46.05
TraesCS5A01G317400.1	Wheat	plastid	37.14	45.88
TraesCS1A01G088700.1	Wheat	extracellular	36.35	45.26
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	37.14	44.4
TraesCS6A01G337300.1	Wheat	mitochondrion	35.4	43.98
TraesCS6A01G093200.1	Wheat	golgi	34.6	43.86
TraesCS5A01G172200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	36.83	43.77
TraesCS2A01G310200.1	Wheat	vacuole	34.44	42.97

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	InterPro:CBM_49
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0030246	InterPro:Glyco_hydro_9	InterPro:IPR012341	PFAM:PF00759
PFAM:PF09478	PANTHER:PTHR22298	PANTHER:PTHR22298:SF46	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3A01G144600	EnsemblPlants:TraesCS3A01G144600.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:-:127088326..127090787

Molecular Weight (calculated)

68662.9 Da

IEP (calculated)

8.155

GRAVY (calculated)

-0.226

Length

630 amino acids

Sequence
(BLAST)

001: MAFNQPAIAM GLLVGLVLSA MAQVAYCAGG RTTQNYREAL AKSILFLEAQ RSGVLPASQR VVWRSNSGLH DGKANGVDLT GGYYDAGDNV KFGLPMAFTV
101: TMMSWSVLEY GRQMQAAGEL GNALEAIKWG TDYFVKAHPE ANVLYGEVGD GDSDHFCWQR PEEMTTSRQA YRLDPQRPGS DLAGETAAAM AAASLVFRRS
201: NPGYANLLLQ HSKQLFDFAD KYRGRYDASI PLARNYYQSV SGYSDELLWA AAWLFQATDD RRYLDYLANN ADAMGGTGWS TAMFSWDIKY AGVQVLAAKI
301: LLQGRAGRHA AVLQRYRQKA DFFVCATLGK QGYGNVKRTP GGLLYHQQWN NLQYVTSGSF LLAAYSDSLA AARQAAVWCP AGAASPAQIM AFAKSQVDYV
401: LGSNPRATSY MVGYGFIYPL EAHHRGASIV SFKSNPSFVA CKAGYAIWYP RKSSNPNLLE GAIVGGPDEF DNFVDDRNNY KQTEAPTYNN APFMGVLARL
501: AAGRRFDQSI PDGLDNQTSV VPSLSAAADQ GEHASPIVIE QNATASWTEK GRTYHRYAVT VTNRSVNKTV HELYLGIAEL YGPVTGLDKN RYGHLLPDTA
601: PSVPAGGSVT FEYAHAAPPA NVWVTGYKLV

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.