CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	80.33	66.82
Zm00001d008952_P001	Maize	extracellular	72.98	61.55
Os01t0220100-01	Rice	extracellular, vacuole	61.4	52.19
HORVU3Hr1G029470.2	Barley	endoplasmic reticulum, extracellular, vacuole	59.01	51.52
Solyc12g055970.1.1	Tomato	cytosol, nucleus	43.01	50.65
CDY08373	Canola	cytosol, extracellular, mitochondrion, nucleus	39.15	50.47
TraesCS3A01G144600.1	Wheat	extracellular, vacuole	56.99	49.21
Os01t0219600-00	Rice	mitochondrion	57.54	48.91
EES19222	Sorghum	vacuole	55.7	48.33
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	57.17	47.63
PGSC0003DMT400012809	Potato	extracellular, vacuole	46.14	46.48
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	48.71	45.3
PGSC0003DMT400032028	Potato	endoplasmic reticulum, extracellular, vacuole	49.08	42.72
Solyc08g082250.2.1	Tomato	extracellular	48.71	42.4
KRH41305	Soybean	nucleus	48.35	42.08
KRH60035	Soybean	nucleus	48.16	41.99
VIT_02s0025g01380.t01	Wine grape	extracellular, vacuole	47.06	40.7
CDX90780	Canola	endoplasmic reticulum, extracellular	46.51	40.42
AT4G11050.1	Thale cress	vacuole	46.14	40.1
CDY47849	Canola	extracellular, vacuole	45.22	39.68
CDY34422	Canola	endoplasmic reticulum, extracellular, vacuole	45.22	39.68
CDY05130	Canola	extracellular, vacuole	45.4	39.46
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	45.04	39.45
CDY46529	Canola	extracellular, vacuole	45.04	39.45
Bra027735.1-P	Field mustard	extracellular, vacuole	44.67	39.19
OQU76161	Sorghum	vacuole	30.7	37.87
KXG21209	Sorghum	cytosol	25.74	35.99
EES15002	Sorghum	endoplasmic reticulum, extracellular	32.72	35.18
EER98860	Sorghum	golgi, mitochondrion, vacuole	32.72	32.84
EES13091	Sorghum	vacuole	37.68	32.54
EES00659	Sorghum	vacuole	27.94	30.34
EES06282	Sorghum	extracellular, vacuole	29.78	30.28
EES04405	Sorghum	plasma membrane, vacuole	28.49	30.16
EES07307	Sorghum	vacuole	25.92	27.98
EES13257	Sorghum	extracellular	25.55	27.69
EES13778	Sorghum	extracellular	26.1	27.47
EES05890	Sorghum	vacuole	24.63	26.96
EES12225	Sorghum	plastid	25.0	26.41
EER89549	Sorghum	mitochondrion	26.1	25.27
EES07289	Sorghum	mitochondrion	35.11	25.2
OQU89810	Sorghum	extracellular, plastid, vacuole	24.45	23.79

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	UniProt:A0A1B6Q0Y5
InterPro:CBM_49	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	GO:GO:0030246	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS
InterPro:IPR012341	EnsemblPlants:KXG31545	ProteinID:KXG31545	ProteinID:KXG31545.1	PFAM:PF00759	PFAM:PF09478
ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF46	MetaCyc:PWY-6788	SMART:SM01063	EnsemblPlantsGene:SORBI_3003G015800
SUPFAM:SSF48208	UniParc:UPI00081AD907	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:1430662..1436632

Molecular Weight (calculated)

58022.3 Da

IEP (calculated)

7.983

GRAVY (calculated)

-0.454

Length

544 amino acids

Sequence
(BLAST)

001: MGAPPEPHGL AASSGRKEAT QGRKLADEEG GQQRRRGGEG GERRHGSTSG AAGLAASPDL GWEETLEGGR EGREGRREEA VQGRALTGKG ADDDDNNGGE
101: TEFTRKLGSL LEKHGFSHSE CVGVLLFDFA DKYRGRYDSS ITVARKYYAS SSGYGAELLW AAAWLHEATG ESRYLDYLAT NADALGGTGW SINQFGWDVK
201: YPGVQVLAAM FLLRRGGNAG AHANVLRRYK QKADLFACSC LGRGGANSVR RTPGGMVYHQ SWNNVQFVTS AAFLLAAYAD HLAAAGQAAQ CPSGGSSAQP
301: SELLAFARSQ VDYILGSNPR ATSYMAHHRG ASIVSVKANP SFVSCQAGYS SWYHRRSANP NLLDGATVGG PDEYDNFADE RDNYEQTEAT TYNNAPLMGV
401: LARLAAGHGG GRFGHHSVAA DLPAEASSST AINRTSLPSP TPAAPEHASP IEIEQNATAS WTERGKTYHR YAVTVTNRSL IKTVHELHIG ISKLYGQVWG
501: VNKARYGYVL PSGLPSLPAG KSASFVYVQA APPADVWVTG YKLL

Best Arabidopsis Sequence Match ( AT1G48930.1 )
(BLAST)

001: MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNRKELS SSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE TAAALAAASL AFKPFNSSYS
201: ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG
301: GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG
401: MSYVVGYGPK YPIRVHHRGS SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL SGTAPLVGLF AKLYGGSLGS
501: YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK
601: TLRAGQAYDF VYVQGGPQAK VSVLSYN

Arabidopsis Description

AtGH9C1Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.