Factsheet for Os01t0219600-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	extracellular, plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
PTS1:	peroxisome
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0220100-01	Rice	extracellular, vacuole	79.22	79.22
HORVU3Hr1G029470.2	Barley	endoplasmic reticulum, extracellular, vacuole	69.53	71.43
Zm00001d008952_P001	Maize	extracellular	71.56	71.01
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	72.03	70.49
TraesCS3A01G144600.1	Wheat	extracellular, vacuole	67.19	68.25
Os05t0212300-01	Rice	extracellular, vacuole	66.88	68.04
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	68.59	67.23
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	57.5	62.91
KRH60035	Soybean	nucleus	60.47	62.02
KRH41305	Soybean	nucleus	60.16	61.6
VIT_02s0025g01380.t01	Wine grape	extracellular, vacuole	60.0	61.05
PGSC0003DMT400032028	Potato	endoplasmic reticulum, extracellular, vacuole	59.38	60.8
CDY47849	Canola	extracellular, vacuole	58.75	60.65
CDY34422	Canola	endoplasmic reticulum, extracellular, vacuole	58.59	60.48
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	58.59	60.39
CDY46529	Canola	extracellular, vacuole	58.44	60.23
Bra027735.1-P	Field mustard	extracellular, vacuole	58.28	60.16
Solyc08g082250.2.1	Tomato	extracellular	58.75	60.16
PGSC0003DMT400012809	Potato	extracellular, vacuole	49.53	58.7
AT4G11050.1	Thale cress	vacuole	56.72	57.99
CDX90780	Canola	endoplasmic reticulum, extracellular	56.56	57.83
CDY05130	Canola	extracellular, vacuole	56.41	57.67
KXG31545	Sorghum	cytosol	48.91	57.54
Os02t0738600-01	Rice	mitochondrion	47.66	55.15
Os08t0425300-00	Rice	extracellular	45.31	54.82
Os09t0394300-01	Rice	extracellular, vacuole	37.19	53.97
Os02t0151300-01	Rice	endoplasmic reticulum, extracellular, vacuole	44.53	53.37
CDY08373	Canola	cytosol, extracellular, mitochondrion, nucleus	35.16	53.32
Solyc12g055970.1.1	Tomato	cytosol, nucleus	38.12	52.81
Os06t0247900-01	Rice	cytosol	36.88	51.64
Os01t0312800-01	Rice	extracellular	40.0	51.3
Os06t0256900-01	Rice	endoplasmic reticulum, extracellular, vacuole	38.75	49.9
Os02t0123700-01	Rice	extracellular	38.91	49.5
Os02t0733300-01	Rice	extracellular	39.22	49.41
Os08t0114200-01	Rice	plastid	39.69	48.57
Os04t0443300-00	Rice	vacuole	37.66	48.2
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	38.28	47.85
Os09t0530200-01	Rice	mitochondrion	38.12	47.38
Os04t0674800-01	Rice	extracellular	44.06	45.12
Os08t0387400-01	Rice	extracellular	36.25	44.96
Os02t0778600-01	Rice	plasma membrane	34.06	43.51

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	EntrezGene:4324641	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
EMBL:AK111165	ProteinID:BAD81358.1	ProteinID:BAD81424.1	ProteinID:BAF04335.1	ProteinID:BAS71063.1	InterPro:CBM_49
ProteinID:EAZ11062.1	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810
GO:GO:0009056	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245
GO:GO:0030246	GO:GO:0071555	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:IPR012341	EnsemblPlantsGene:Os01g0219600
EnsemblPlants:Os01t0219600-00	PFAM:PF00759	PFAM:PF09478	ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF46
UniProt:Q5NAT8	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000049E751	RefSeq:XP_015642063.1
SEG:seg	:	:	:	:	:

Description

glycoside hydrolase OsGH9C2Similar to Endo-beta-1,4-glucanase precursor (EC 3.2.1.4). (Os01t0219600-00)

Coordinates

chr1:-:6541971..6544461

Molecular Weight (calculated)

67908.2 Da

IEP (calculated)

9.607

GRAVY (calculated)

-0.233

Length

640 amino acids

Sequence
(BLAST)

001: MARRGGAAAS SSMANLLGVA LVLAATAQTS ARGGGGGGRH DYRMALSKSI LYFEAQRSGV LPGNQRIAWR ANSGLADGKA NGVDLVGGYY DAGDNVKFGF
101: PMAFTVTMMA WSVLEYGKQM AAAGELGHAM DAVRWGADYF VKAHPAPNVL YGEVGDGDSD HVCWQRPEDM TTSRQAYRLD PQHPGSDLAG ETATALAAAS
201: LVFRSSNPGY ANQLLQHSKQ LFDFADKYRG KYDDSMPVVK KFYGSFSGYG DELLWASAWL YQATDNRRYL DYLANNGDAL GGTGWATNEF GWDVKYPGVQ
301: VLAAKFLLQG KAGPHAAVLR RYQRNADVFA CSCLGKGGGG GNVGRTPGGL MYHQGWNNLQ FVTGASFLLA VYADHLAAAG RGQAVVRCQA GPAARASELV
401: ALAKSQVDYI LGSNPRGISY MVGYGARYPR RAHHRGASIV SIRANPSFVS CKDGYASWFG RAGSNPNLLD GAVVGGPDGR DGFADERNNY QQTEVATYNN
501: APLMGVLARL AGGGRGGLAE AAIKRPDNQT LLPPLAAAAS PVEITQLNAT ASWKKDGRTY RRYAATVSNR SPAGGKTVEE LHIGIGKPHG PVWGLEKAAR
601: YGYVLPSSLA AGESAAFAYV VRGRAAPPPA DVWVIGYKLV

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.