Factsheet for Os06t0247900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76161	Sorghum	vacuole	77.02	79.82
TraesCS7D01G201000.1	Wheat	extracellular, vacuole	79.43	68.23
TraesCS7B01G104600.1	Wheat	vacuole	79.43	68.11
Os09t0394300-01	Rice	extracellular, vacuole	65.65	68.03
Zm00001d044744_P001	Maize	extracellular, vacuole	78.56	66.24
Os02t0738600-01	Rice	mitochondrion	77.68	64.2
HORVU7Hr1G040680.3	Barley	vacuole	78.12	63.86
TraesCS7A01G197900.1	Wheat	extracellular, vacuole	79.65	62.44
KRH14764	Soybean	cytosol, nucleus, vacuole	55.14	62.07
Os08t0425300-00	Rice	extracellular	64.11	55.39
Solyc07g049300.2.1	Tomato	extracellular, vacuole	58.64	53.28
PGSC0003DMT400001781	Potato	extracellular, vacuole	58.64	53.28
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	58.86	51.63
Bra021821.1-P	Field mustard	vacuole	57.33	51.47
GSMUA_Achr7P02160_001	Banana	vacuole	56.89	50.98
Os02t0151300-01	Rice	endoplasmic reticulum, extracellular, vacuole	59.3	50.75
Bra005536.1-P	Field mustard	vacuole	57.33	50.19
CDY17123	Canola	vacuole	57.33	50.19
CDY19428	Canola	vacuole	57.33	50.19
KRH73374	Soybean	vacuole	57.11	49.81
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	55.58	49.8
CDY19174	Canola	vacuole	57.33	49.72
AT2G32990.1	Thale cress	extracellular, vacuole	56.89	49.52
CDY23776	Canola	vacuole	56.02	48.67
Os01t0220100-01	Rice	extracellular, vacuole	52.3	37.34
Os05t0212300-01	Rice	extracellular, vacuole	50.98	37.04
Os01t0219600-00	Rice	mitochondrion	51.64	36.88
Os06t0256900-01	Rice	endoplasmic reticulum, extracellular, vacuole	39.61	36.42
Os01t0312800-01	Rice	extracellular	39.61	36.27
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	40.48	36.13
Os08t0114200-01	Rice	plastid	41.14	35.95
Os04t0443300-00	Rice	vacuole	38.95	35.6
Os02t0733300-01	Rice	extracellular	39.39	35.43
Os02t0123700-01	Rice	extracellular	38.51	34.99
Os02t0778600-01	Rice	plasma membrane	37.42	34.13
Os04t0674800-01	Rice	extracellular	46.17	33.76
Os08t0387400-01	Rice	extracellular	37.42	33.14
Os09t0530200-01	Rice	mitochondrion	36.32	32.23

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	UniProt:A0A0P0WUW3
ProteinID:BAS97039.1	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	EnsemblPlantsGene:Os06g0247900
EnsemblPlants:Os06t0247900-01	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF52	SUPFAM:SSF48208
UniParc:UPI0000E12742	SEG:seg	:	:	:	:

Description

glycoside hydrolase OsGH9B9Similar to Endo-beta-1,4-glucanase precursor (EC 3.2.1.4). (Os06t0247900-01)

Coordinates

chr6:-:7671257..7674776

Molecular Weight (calculated)

50117.1 Da

IEP (calculated)

6.552

GRAVY (calculated)

-0.509

Length

457 amino acids

Sequence
(BLAST)

001: TDRQPTTPHH FSHHRSNTPT AATTSPISAA AGELAHALDA IKWGTDYFIK AHTKPHELWA EVGDGDTDHY CWQRPEDMTT SRQAYKVDRR RPGSDVAGET
101: AAAMAAASIV FRQSNPHYSH LLLHHAQQLF EFADTYRGKY DSSIAEVKSY YASVSGYHDE LLWAALWLHR ATGRAAYLDY AVDNADEFGG TGWAITEFSW
201: DVKYAGVQIL AARLLMRGEH EERHRGTLER YREKAEHYVC ACMGRNAAGG ADANVERSPG GMLYVRQWNN MQYVTNAAFL LSAYSDYLAG AGDGDGDGGG
301: GVATCVGGGG AGAGEVFAAA REQVDYVLGS NPRGMSYLVG YGERFPARVH HRAASIVPYK DSKEFIGCAQ GFDDWFGRRG ANPNVVVGAI VGGPDRRDRF
401: RDDRENYMQT EACTYNTAPM VGMFAMLNRL SRQESPSTTT TTTATTSSPE MGLSVNR

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.