CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42597	Canola	extracellular	94.65	94.65
Bra011882.1-P	Field mustard	extracellular	99.57	94.51
CDY22399	Canola	extracellular	82.66	78.46
CDX72723	Canola	extracellular	81.58	77.44
AT4G39000.1	Thale cress	extracellular, vacuole	77.73	73.63
CDY22400	Canola	extracellular, vacuole	68.31	68.6
CDY42599	Canola	cytosol	57.82	56.84
CDY41955	Canola	extracellular, vacuole	58.46	55.15
Solyc01g110340.2.1	Tomato	extracellular, vacuole	57.39	54.03
KRH60771	Soybean	extracellular, vacuole	56.75	53.97
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	57.17	53.94
KRH51463	Soybean	extracellular	56.53	53.44
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	56.32	53.13
KRH29353	Soybean	extracellular, vacuole	56.75	52.79
GSMUA_Achr1P07760_001	Banana	vacuole	55.25	51.5
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	47.54	50.45
GSMUA_Achr2P03400_001	Banana	extracellular	53.53	50.1
CDY04737	Canola	extracellular, vacuole	52.25	49.59
CDY21424	Canola	extracellular	52.03	49.19
CDX68334	Canola	endoplasmic reticulum	51.18	48.98
CDY23486	Canola	extracellular	51.18	48.98
CDX96271	Canola	extracellular, vacuole	51.39	48.1
CDY11552	Canola	endoplasmic reticulum, extracellular	51.39	48.1
TraesCS5A01G317400.1	Wheat	plastid	52.46	48.04
CDY32480	Canola	extracellular, vacuole	52.46	47.85
HORVU5Hr1G081200.5	Barley	vacuole	52.46	47.57
TraesCS5B01G318000.1	Wheat	vacuole	52.25	47.56
Os09t0530200-01	Rice	mitochondrion	52.03	47.18
CDX97262	Canola	vacuole	51.39	46.69
CDY37459	Canola	endoplasmic reticulum, extracellular	50.96	46.67
CDY52780	Canola	extracellular, vacuole	50.75	45.75
CDY22043	Canola	extracellular, vacuole	50.75	45.75
CDY12503	Canola	extracellular, vacuole	47.11	45.55
CDY25758	Canola	extracellular, vacuole	46.9	45.34
Zm00001d021280_P004	Maize	vacuole	53.32	45.27
CDY03686	Canola	extracellular	46.47	44.93
TraesCS5D01G323700.2	Wheat	vacuole	52.68	44.73
CDY03687	Canola	extracellular	46.25	44.63
CDY37939	Canola	extracellular, vacuole	46.04	44.51
CDY66787	Canola	extracellular, plastid, vacuole	46.04	44.42
OQU89810	Sorghum	extracellular, plastid, vacuole	53.1	44.36
CDX96319	Canola	extracellular, plastid, vacuole	45.4	43.8
CDY37936	Canola	extracellular	42.61	43.64
CDX74666	Canola	vacuole	45.18	43.15
CDY10945	Canola	extracellular, vacuole	44.11	42.92
CDX83426	Canola	extracellular, plastid, vacuole	43.9	42.8
CDX74667	Canola	extracellular, vacuole	39.61	42.73
CDY60076	Canola	extracellular	22.06	42.56
CDX74664	Canola	extracellular, vacuole	44.54	42.54
CDX94202	Canola	vacuole	43.68	42.5
CDY47675	Canola	vacuole	44.33	42.33
CDX74668	Canola	extracellular	44.54	42.19
CDY44116	Canola	extracellular	43.25	42.08
CDY10895	Canola	extracellular	43.04	41.88
CDY47674	Canola	extracellular, vacuole	44.11	41.78
CDX95605	Canola	extracellular, vacuole	43.9	41.08
CDY17123	Canola	vacuole	45.61	40.8
CDY19428	Canola	vacuole	45.18	40.42
CDY19174	Canola	vacuole	45.4	40.23
CDY01915	Canola	cytosol	31.05	39.94
CDY21221	Canola	golgi, vacuole	41.54	39.92
CDY30943	Canola	golgi, vacuole	41.54	39.92
CDY23776	Canola	vacuole	44.54	39.54
CDX87948	Canola	extracellular, vacuole	40.9	39.3
CDY12319	Canola	cytosol, extracellular, vacuole	40.9	39.3
CDY47849	Canola	extracellular, vacuole	45.82	34.52
CDY34422	Canola	endoplasmic reticulum, extracellular, vacuole	45.61	34.35
CDY05130	Canola	extracellular, vacuole	46.04	34.34
CDY46529	Canola	extracellular, vacuole	45.61	34.3
CDX90780	Canola	endoplasmic reticulum, extracellular	45.4	33.87
CDX93707	Canola	vacuole	44.75	33.49
CDY60075	Canola	vacuole	44.75	33.39
CDY65179	Canola	extracellular	44.75	33.39
CDY59895	Canola	cytosol, vacuole	33.19	30.57
CDY08373	Canola	cytosol, extracellular, mitochondrion, nucleus	23.55	26.07

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:A0A078HX44
UniProt:A0A078HX44	EnsemblPlants:CDY41954	ProteinID:CDY41954	ProteinID:CDY41954.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00073941001
InterPro:Glyco_hydro_9	InterPro:IPR012341	PFAM:PF00759	PANTHER:PTHR22298	PANTHER:PTHR22298:SF29	MetaCyc:PWY-6788
SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EDCCC9	SEG:seg	:

Description

BnaA01g05260DBnaA01g05260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HX44]

Coordinates

chrLK032511:-:43444..45750

Molecular Weight (calculated)

52043.8 Da

IEP (calculated)

6.647

GRAVY (calculated)

-0.190

Length

467 amino acids

Sequence
(BLAST)

001: MKPSILILTV FVLLLLVPTV IPHNYSDALH KSILFFEGQR SGRLPRQQRM LWRGDSALKD GENLNTDLVG GYYDAGDNVK FHFPMAFTAT MLAWSSIDFS
101: CYMSDNDFRH NLVNIKWATD YLLKTVSQLP HRIFVQVGEA QPDHNCWERP EDMDTPRTAF ALDAPGPASD LAGEIAAALA AASIAFKQSR PTYSKLLLSK
201: AIQTFHNNGY KDELLWGAAW LRRATGSDNY LEYLVNNRET FGVDYNYLDF GWDSKFGGVD VLIAKEVFEK NVSALTPFKD IAEKMMCAVF PETAGLHMSY
301: TPGGLLYKPV GSQLQSTAAM SFLILTYADY LSKSSQQLSC GNLKFQPDSL RRIVKRQVDY ILGDNPMHVS YMVGYGDQYP RQVHHRGSSI PSVKVQSTAF
401: GCTQGWNIFH SDNPNPNILV GAVVGGPNVD DTFIGKRTNA TDTEPTTYIN APLVGVFAYF NSNPNIT

Best Arabidopsis Sequence Match ( AT4G39000.1 )
(BLAST)

001: MKASIYLVTV FILLLLLLPT AIPHDYSDAL RKSILFFEGQ RSGRLPKQQR MAWRRNSALN DGKNLKTDLV GGYYDAGDNV KFHFPMAFTA TMLAWSSVDF
101: GRYMSQHDFR HNLVAVKWAT DYLLKTVSQL PNRIFVHVGE VQPDHDCWER PEDMDTPRTA FALDAPYPAS DLAGEIAAAL AAASIAFKQA NPKYSAILLN
201: KAVQTFQYAD SHRGSYTDNP GIKQAVCPFY CSVNGYKDEL LWGAAWLRRA TGEDSYLRYL VDNGQAFGES SNYFEFGWDN KVGGVNVLVA KEVLQNNVTA
301: IAAYKDTAEK MMCSFLPETN GPHMSYTPGG LIYKPGSTQL QNTAALSFLL LTYADYLSTS SQQLNCGNLK FQPDSLRRIV KRQVDYVLGD NPMKLSYMIG
401: YGERYPGLIH HRGSSIPSVT VHPAAFGCIA GWNIFSSPNP NPNILIGAVI GGPDVDDRFI GGRTNASETE PTTYINAPFV GVFAYFKSNP NFS

Arabidopsis Description

AtGH9B17Endoglucanase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.