Factsheet for Bra011882.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41954	Canola	vacuole	94.51	99.57
Bra033592.1-P	Field mustard	extracellular	82.52	82.52
AT4G39000.1	Thale cress	extracellular, vacuole	77.24	77.08
Bra033591.1-P	Field mustard	extracellular, vacuole	67.68	67.96
Bra011881.1-P	Field mustard	cytosol	57.93	60.0
KRH60771	Soybean	extracellular, vacuole	56.5	56.62
Solyc01g110340.2.1	Tomato	extracellular, vacuole	56.91	56.45
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	56.71	56.36
KRH51463	Soybean	extracellular	56.5	56.28
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	56.5	56.16
KRH29353	Soybean	extracellular, vacuole	56.91	55.78
GSMUA_Achr1P07760_001	Banana	vacuole	54.67	53.69
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	47.15	52.73
GSMUA_Achr2P03400_001	Banana	extracellular	52.85	52.1
Bra024571.1-P	Field mustard	extracellular	51.63	51.42
Bra003946.1-P	Field mustard	extracellular	50.41	50.82
TraesCS5A01G317400.1	Wheat	plastid	52.24	50.39
Bra016192.1-P	Field mustard	extracellular, vacuole	50.81	50.1
HORVU5Hr1G081200.5	Barley	vacuole	52.24	49.9
TraesCS5B01G318000.1	Wheat	vacuole	52.03	49.9
Os09t0530200-01	Rice	mitochondrion	51.63	49.32
Bra018559.1-P	Field mustard	extracellular, vacuole	51.22	49.03
Bra032584.1-P	Field mustard	extracellular, vacuole	51.42	48.94
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	46.95	47.83
Bra036281.1-P	Field mustard	extracellular, vacuole	50.2	47.68
Bra007983.1-P	Field mustard	extracellular	46.54	47.41
Bra007982.1-P	Field mustard	extracellular	46.54	47.31
Zm00001d021280_P004	Maize	vacuole	52.64	47.09
TraesCS5D01G323700.2	Wheat	vacuole	52.44	46.91
OQU89810	Sorghum	extracellular, plastid, vacuole	52.44	46.15
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	45.33	46.07
Bra019296.1-P	Field mustard	extracellular, vacuole	44.51	45.62
Bra004846.1-P	Field mustard	nucleus	43.29	45.32
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	43.7	45.17
Bra013709.1-P	Field mustard	extracellular	43.5	44.58
Bra004845.1-P	Field mustard	extracellular	44.11	44.38
Bra004844.1-P	Field mustard	extracellular, vacuole	43.29	43.56
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	39.02	43.44
Bra019455.1-P	Field mustard	golgi, vacuole	42.07	42.59
Bra005536.1-P	Field mustard	vacuole	44.31	41.76
Bra021821.1-P	Field mustard	vacuole	42.48	41.06
Bra032270.1-P	Field mustard	extracellular	44.72	36.12
Bra027735.1-P	Field mustard	extracellular, vacuole	45.12	35.81
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	44.92	35.59
Bra018765.1-P	Field mustard	vacuole	44.92	35.42

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra011882
EnsemblPlants:Bra011882.1	EnsemblPlants:Bra011882.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_9	InterPro:IPR012341	UniProt:M4D5X5
PFAM:PF00759	PANTHER:PTHR22298	PANTHER:PTHR22298:SF29	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002545E7A	SEG:seg	:	:	:	:

Description

AT4G39000 (E=7e-216) AtGH9B17 | AtGH9B17 (Arabidopsis thaliana glycosyl hydrolase 9B17); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA01:-:89555..91876

Molecular Weight (calculated)

54839.0 Da

IEP (calculated)

6.570

GRAVY (calculated)

-0.212

Length

492 amino acids

Sequence
(BLAST)

001: MKPSILILTV FVLLLLVPTV IPHNYSDALH KSILFFEGQR SGRLPRQQRM LWRGDSALKD GENLNTDLVG GYYDAGDNVK FHFPMAFTAT MLAWSSIDFS
101: CYMSDNDFRH TLVNIKWATD YLLKTVSQLP HRIFVQVGEA QPDHNCWERP EDMDTPRTAF ALDAPGPASD LAGEIAAALA AASIAFKQSR PTYSKLLLSK
201: AIQTFQYADM HRGSYADNQN VHNAACPFYC SNNGYKDELL WGAAWLRRAT GSDNYLEYLV NNRETFGVDY NYLDFGWDSK FGGVDVLIAK EVFEKNVSAL
301: TPFKDIAEKM MCAVFPETAG LHMSYTPGGL LYKPVGSQLQ STAAMSFLIL TYADYLSKSS QQLSCGNLKF QPDSLRRIVK RQVDYILGDN PMHVSYMVGY
401: GDQYPRQVHH RGSSIPSVKV QSTAFGCTQG WNIFHSDNPN PNILVGAVVG GPNVDDTFIG KRTNATDTEP TTYINAPLVG VFAYFNSNPN IT

Best Arabidopsis Sequence Match ( AT4G39000.1 )
(BLAST)

001: MKASIYLVTV FILLLLLLPT AIPHDYSDAL RKSILFFEGQ RSGRLPKQQR MAWRRNSALN DGKNLKTDLV GGYYDAGDNV KFHFPMAFTA TMLAWSSVDF
101: GRYMSQHDFR HNLVAVKWAT DYLLKTVSQL PNRIFVHVGE VQPDHDCWER PEDMDTPRTA FALDAPYPAS DLAGEIAAAL AAASIAFKQA NPKYSAILLN
201: KAVQTFQYAD SHRGSYTDNP GIKQAVCPFY CSVNGYKDEL LWGAAWLRRA TGEDSYLRYL VDNGQAFGES SNYFEFGWDN KVGGVNVLVA KEVLQNNVTA
301: IAAYKDTAEK MMCSFLPETN GPHMSYTPGG LIYKPGSTQL QNTAALSFLL LTYADYLSTS SQQLNCGNLK FQPDSLRRIV KRQVDYVLGD NPMKLSYMIG
401: YGERYPGLIH HRGSSIPSVT VHPAAFGCIA GWNIFSSPNP NPNILIGAVI GGPDVDDRFI GGRTNASETE PTTYINAPFV GVFAYFKSNP NFS

Arabidopsis Description

AtGH9B17Endoglucanase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.