Factsheet for Bra004846.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 3
plasma membrane 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74668	Canola	extracellular	99.79	95.13
AT2G44560.1	Thale cress	extracellular, vacuole	80.85	77.39
Bra004845.1-P	Field mustard	extracellular	80.21	77.1
AT2G44540.1	Thale cress	vacuole	78.94	75.56
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	76.38	75.42
Bra004844.1-P	Field mustard	extracellular, vacuole	77.66	74.64
AT2G44550.1	Thale cress	extracellular, plasma membrane, vacuole	77.66	74.49
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	62.34	60.66
PGSC0003DMT400069884	Potato	extracellular, vacuole	61.28	60.13
KRG89135	Soybean	extracellular	60.43	58.56
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	59.36	58.12
Solyc05g052530.1.1	Tomato	extracellular	60.0	58.02
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	53.83	56.35
TraesCS1D01G075100.1	Wheat	vacuole	56.38	54.08
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	56.38	54.08
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	53.19	53.88
TraesCS1A01G072300.1	Wheat	vacuole	56.17	53.44
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	55.32	53.06
HORVU1Hr1G015550.1	Barley	vacuole	55.11	52.86
TraesCS1A01G072100.1	Wheat	nucleus	54.89	52.65
TraesCS1D01G074800.1	Wheat	vacuole	51.06	51.72
KXG21209	Sorghum	cytosol	41.91	50.64
Zm00001d035442_P001	Maize	extracellular, vacuole	43.19	48.68
Bra019296.1-P	Field mustard	extracellular, vacuole	48.72	47.71
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	51.91	47.66
Bra013709.1-P	Field mustard	extracellular	47.66	46.67
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	43.4	46.15
Bra011881.1-P	Field mustard	cytosol	45.96	45.47
Bra007982.1-P	Field mustard	extracellular	46.81	45.45
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	46.81	45.45
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	46.6	45.34
Bra019455.1-P	Field mustard	golgi, vacuole	46.81	45.27
Bra007983.1-P	Field mustard	extracellular	46.17	44.93
Bra005536.1-P	Field mustard	vacuole	49.57	44.64
Bra032584.1-P	Field mustard	extracellular, vacuole	48.94	44.49
Bra003946.1-P	Field mustard	extracellular	46.17	44.47
Bra021821.1-P	Field mustard	vacuole	48.09	44.4
Bra016192.1-P	Field mustard	extracellular, vacuole	46.38	43.69
Bra036281.1-P	Field mustard	extracellular, vacuole	47.87	43.44
Bra024571.1-P	Field mustard	extracellular	45.53	43.32
Bra011882.1-P	Field mustard	extracellular	45.32	43.29
Bra033592.1-P	Field mustard	extracellular	45.32	43.29
Bra018559.1-P	Field mustard	extracellular, vacuole	47.23	43.19
Bra033591.1-P	Field mustard	extracellular, vacuole	44.04	42.24
Bra032270.1-P	Field mustard	extracellular	51.49	39.74
Bra018765.1-P	Field mustard	vacuole	51.91	39.1
Bra027735.1-P	Field mustard	extracellular, vacuole	51.06	38.71
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	51.06	38.65

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra004846
EnsemblPlants:Bra004846.1	EnsemblPlants:Bra004846.1-P	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341
UniProt:M4CKW0	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF12	SUPFAM:SSF48208
UniParc:UPI0002547D3C	SEG:seg	:	:	:	:

Description

AT2G44560 (E=2e-220) AtGH9B11 | AtGH9B11 (Arabidopsis thaliana glycosyl hydrolase 9B11); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA05:-:2116326..2118247

Molecular Weight (calculated)

51217.3 Da

IEP (calculated)

8.595

GRAVY (calculated)

-0.323

Length

470 amino acids

Sequence
(BLAST)

001: MSSMTLGAVS RHYGEALTKS LFYFEAQRSG KLPSNQRVNW RGDSALRDGS DAHVDLTGGY YDAGDNMKFG FPLAFTTTML AWSSVEMASQ LKAHKEHKNV
101: LAALKWATDY LIKAHPEPNV LYGQVGDGNS DHACWMRPED MTTPRPSYRI DAQHPGADLA GETAAAMAAA SVAFAPYNAA YAKKLISHAK DLFEFAKAHP
201: GVYQSSISNA GGFYASSGYE DELLWAAAWL HRATKKQIYL NYLNEASNTG GSRTVFAWGD KFVGAQVLMA KLSLEGKVNI NKKMEEYKSM AEQFICNCAQ
301: KGSNNVKITQ GGLLWFLPWN NLQYTTAASF VLSAYSKYLK AANASIKCHG GSLQASDLRN LARAQVDYIL GSNPKNMSYM VGFGTNYPKR PHHRGASIVS
401: IKKNRTAVEC NAGFNDWYHS PAPNPNVLTG ALVGGPDEND AFGDERTDFQ HSEPVPATVA PFVGVLAAIA

Best Arabidopsis Sequence Match ( AT2G44560.1 )
(BLAST)

001: MSQLKIGSSQ CLWTSICIVL FVLSMARGAV SRNYGDALTK SLLYFEAQRS GKLPSNQRVT WRGDSALRDG SDAHVDLTGG YYDAGDNMKF GFPLAFFTTM
101: LAWSNIEMAT QLKAHQEQEN ALAALKWATD FLIKAHPEPN VLYGQVGDGN SDHECWMRPE DMTTPRPSFR IDAQHPGSDL AGETAAAMAA ASIAFAPSDE
201: AYAQILIGHA KELFEFAKAY PGIYQNSITN AGGFYASSGY EDELLWAAAW LHRATNDQIY LDYLTQASGT GGPRTAFSWD DKFVGAQVLV AKLALEGKVE
301: SNGKIAEYKS MAEQFICNCA QKGSNNVKKT PGGLLYFLPW NNLQYTTAAT FVLSAYSKYL TDAKASIQCP NGALQASDLL DLARSQVDYI LGSNPQNMSY
401: MVGVGTNYPK KPHHRAASIV SITKDKTPVT CSEGFDAWFN NPAPNPNVLM GAVVGGPNDN DVYGDERTDY QHAEPAPATA APFVGVLAAV A

Arabidopsis Description

AtGH9B11Endoglucanase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8Q4]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.