Factsheet for PGSC0003DMT400069884

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 6
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g052530.1.1	Tomato	extracellular	90.4	89.09
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	65.55	65.01
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	62.42	62.29
Bra004846.1-P	Field mustard	nucleus	60.13	61.28
AT2G44560.1	Thale cress	extracellular, vacuole	62.0	60.49
AT2G44550.1	Thale cress	extracellular, plasma membrane, vacuole	61.17	59.8
AT2G44570.1	Thale cress	extracellular	61.38	59.76
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	55.95	59.69
CDX74667	Canola	extracellular, vacuole	53.65	59.35
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	58.66	59.03
AT2G44540.1	Thale cress	vacuole	60.33	58.86
CDX74668	Canola	extracellular	60.54	58.82
CDY47674	Canola	extracellular, vacuole	60.54	58.82
CDX83426	Canola	extracellular, plastid, vacuole	58.66	58.66
KRG89135	Soybean	extracellular	59.29	58.56
Bra004844.1-P	Field mustard	extracellular, vacuole	58.87	57.67
CDY47675	Canola	vacuole	58.87	57.67
CDX74664	Canola	extracellular, vacuole	58.87	57.67
CDX74666	Canola	vacuole	58.66	57.46
Bra004845.1-P	Field mustard	extracellular	58.25	57.06
CDX95605	Canola	extracellular, vacuole	58.66	56.31
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	56.78	55.51
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	53.44	55.17
TraesCS1D01G075100.1	Wheat	vacuole	56.37	55.1
TraesCS1A01G072300.1	Wheat	vacuole	56.58	54.86
TraesCS1A01G072100.1	Wheat	nucleus	55.95	54.69
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	55.95	54.69
HORVU1Hr1G015550.1	Barley	vacuole	55.74	54.49
TraesCS1D01G074800.1	Wheat	vacuole	51.15	52.8
KXG21209	Sorghum	cytosol	42.59	52.44
PGSC0003DMT400001781	Potato	extracellular, vacuole	54.7	52.09
Zm00001d035442_P001	Maize	extracellular, vacuole	43.22	49.64
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	52.61	49.22
PGSC0003DMT400057164	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	43.42	49.06
PGSC0003DMT400031897	Potato	endoplasmic reticulum, extracellular	48.85	46.99
PGSC0003DMT400081314	Potato	extracellular	48.64	46.6
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	47.81	46.26
PGSC0003DMT400023082	Potato	extracellular, vacuole	46.97	46.01
PGSC0003DMT400031762	Potato	extracellular	47.39	45.22
PGSC0003DMT400021687	Potato	vacuole	45.3	45.02
PGSC0003DMT400052749	Potato	extracellular, vacuole	45.51	44.86
PGSC0003DMT400072087	Potato	golgi, vacuole	38.2	42.56
PGSC0003DMT400032028	Potato	endoplasmic reticulum, extracellular, vacuole	55.11	42.24
PGSC0003DMT400012809	Potato	extracellular, vacuole	47.6	42.22
PGSC0003DMT400051238	Potato	extracellular	53.24	40.35

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0000272
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	UniProt:M1CLA9	PFAM:PF00759	EnsemblPlantsGene:PGSC0003DMG401027175
PGSC:PGSC0003DMG401027175	EnsemblPlants:PGSC0003DMT400069884	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF12	SUPFAM:SSF48208
SignalP:SignalP-noTM	UniParc:UPI000295718F	SEG:seg	:	:	:

Description

Cellulase homolog [Source:PGSC_GENE;Acc:PGSC0003DMG401027175]

Coordinates

chr5:-:47827015..47831190

Molecular Weight (calculated)

52929.9 Da

IEP (calculated)

5.198

GRAVY (calculated)

-0.393

Length

479 amino acids

Sequence
(BLAST)

001: MLGFCLVILF VNAASIDYGA ALTKSLLYFE AQRSGKLPSN QRVQWRGDSA LNDGKDDGID LTGGYYDAGD NVKFGFPMAF TITMLAWSAT EFESQLNSKN
101: ELKNALNAIK WGTDYFIKAH KESHVLYGEI GEGISDHKCW ERPEDMTTPR SVYKIDEQHP GADMAGETAA ALAAAAVAFK ESDSGYSNQL LTHAKELFDF
201: AKKFPGVYTS SIPVAGKFYG SSGYEDELLW AAVWLYKATQ DKTYLDYINE KSSSCGGTRL NFSWDDKYIG AQVLIAKDLL ENKFAGNEST LLNEYKKNAE
301: EFICNCIQKG HNNIQKTNGG LLWWDYWNNL QFVTTATFVI TTYADTLSAT KNSLQCSSGN VEPSQLINLV KSQVDYILGE NPQKMSYMVG FGTNYPQEVH
401: HRGASIVSIK KDKKPVGCQE GFDQWFKRNA PNPNVLVGAI VGGPDNSDQY NDSRDNYKQG EAATANSAPL VGVLARLAS

Best Arabidopsis Sequence Match ( AT2G44550.1 )
(BLAST)

001: MSQLKNGSSQ CLWTSICIVL IVMSMAREAV STNYAEALKN SLLYFEAQRS GKLPPNQRVT WRGDSALRDG SDAHIDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSNIEMAS QLRAHHEKGN ALRALKWATD YLIKAHPQPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL AGETAAAMAA ASIAFAPSDK
201: AYANILIGHA KDLFAFAKAH RGLYQNSIPN AGGFYASSGY EDELLWAAAW LHRATNDQIY LDYLTEAETG GPRTVFAWDD KFVGAQVLVA KLALEGKVES
301: SEQIVEYKSM AEQFICNCAQ KGDNNVKKTP GGLLYFLPWN NLQYTTAATF VLSAYSKYLE AAKASIDCPD GALQASDLLQ VARSQVDYIL GSNPQKMSYM
401: VGVGTNYPKK PHHRAASIVS IRQDKTPVTC SGGYDKWYNN PAPNPNVLAG AVVGGPDDND VYGDERSNFQ QAEPATVTTA PLVGVLALVF

Arabidopsis Description

AtGH9B10Endoglucanase 13 [Source:UniProtKB/Swiss-Prot;Acc:O64890]
SUBAcon: [extracellular,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.