Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000354.1-P | Field mustard | extracellular, plastid, vacuole | 78.66 | 81.3 |
| CDX83426 | Canola | extracellular, plastid, vacuole | 79.06 | 81.21 |
| CDX95605 | Canola | extracellular, vacuole | 80.89 | 79.76 |
| AT2G44560.1 | Thale cress | extracellular, vacuole | 77.44 | 77.6 |
| AT2G44540.1 | Thale cress | vacuole | 76.22 | 76.37 |
| AT2G44550.1 | Thale cress | extracellular, plasma membrane, vacuole | 75.61 | 75.92 |
| VIT_13s0067g01190.t01 | Wine grape | extracellular, vacuole | 60.57 | 61.7 |
| PGSC0003DMT400069884 | Potato | extracellular, vacuole | 59.76 | 61.38 |
| VIT_13s0067g01200.t01 | Wine grape | extracellular, vacuole | 59.35 | 60.83 |
| KRG89135 | Soybean | extracellular | 58.54 | 59.38 |
| Solyc05g052530.1.1 | Tomato | extracellular | 58.54 | 59.26 |
| GSMUA_Achr6P15630_001 | Banana | extracellular, vacuole | 53.46 | 58.57 |
| TraesCS1D01G074900.1 | Wheat | cytosol, mitochondrion, plastid, vacuole | 51.42 | 54.53 |
| TraesCS1B01G090700.1 | Wheat | extracellular, vacuole | 54.27 | 54.49 |
| TraesCS1D01G075100.1 | Wheat | vacuole | 54.27 | 54.49 |
| TraesCS1D01G074700.1 | Wheat | extracellular, vacuole | 54.06 | 54.29 |
| TraesCS1A01G072300.1 | Wheat | vacuole | 54.27 | 54.05 |
| HORVU1Hr1G015550.1 | Barley | vacuole | 53.05 | 53.27 |
| TraesCS1A01G072100.1 | Wheat | nucleus | 52.85 | 53.06 |
| TraesCS1D01G074800.1 | Wheat | vacuole | 50.0 | 53.02 |
| KXG21209 | Sorghum | cytosol | 41.46 | 52.44 |
| Zm00001d035442_P001 | Maize | extracellular, vacuole | 42.07 | 49.64 |
| Os05t0129200-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 51.22 | 49.22 |
| AT4G23560.1 | Thale cress | extracellular | 47.15 | 48.43 |
| AT1G02800.1 | Thale cress | extracellular, vacuole | 48.37 | 47.51 |
| AT4G09740.1 | Thale cress | extracellular | 46.14 | 47.49 |
| AT1G22880.1 | Thale cress | extracellular | 46.54 | 47.31 |
| AT1G71380.1 | Thale cress | extracellular | 45.12 | 45.87 |
| AT1G70710.1 | Thale cress | vacuole | 45.33 | 45.33 |
| AT4G02290.1 | Thale cress | plastid | 47.15 | 44.96 |
| AT4G39010.1 | Thale cress | extracellular, vacuole | 45.33 | 44.87 |
| AT1G23210.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 44.51 | 44.79 |
| AT3G43860.1 | Thale cress | extracellular, vacuole | 43.5 | 44.03 |
| AT2G32990.1 | Thale cress | extracellular, vacuole | 46.95 | 44.0 |
| AT4G39000.1 | Thale cress | extracellular, vacuole | 42.28 | 42.19 |
| AT1G48930.1 | Thale cress | vacuole | 51.22 | 40.19 |
| AT4G11050.1 | Thale cress | vacuole | 50.61 | 39.78 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf | EntrezGene:819065 |
| ProteinID:AAC27459.1 | ProteinID:AEC10439.1 | ArrayExpress:AT2G44570 | EnsemblPlantsGene:AT2G44570 | RefSeq:AT2G44570 | TAIR:AT2G44570 |
| RefSeq:AT2G44570-TAIR-G | EnsemblPlants:AT2G44570.1 | TAIR:AT2G44570.1 | Unigene:At.36741 | Symbol:AtGH9B12 | GO:GO:0000272 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008810 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030245 | GO:GO:0071555 | InterPro:Glyco_hydro_9 | InterPro:Glyco_hydro_9_His_AS |
| InterPro:IPR012341 | RefSeq:NP_181985.1 | UniProt:O80497 | PFAM:PF00759 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00592 | PANTHER:PTHR22298 | PANTHER:PTHR22298:SF12 | SUPFAM:SSF48208 |
| SignalP:SignalP-noTM | UniParc:UPI00000AA7CE | SEG:seg | : | : | : |
Description
AtGH9B12Endoglucanase 15 [Source:UniProtKB/Swiss-Prot;Acc:O80497]
Coordinates
chr2:-:18394196..18396337
Molecular Weight (calculated)
53594.2 Da
IEP (calculated)
5.734
GRAVY (calculated)
-0.221
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCISSQCFI TIKSICIVLL LSITCGAVSA NSNYGEALTK SLLYFEAQRS GKLPLDQRVI WRGDSALRDG SDAHVDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSSVEMES QLKAHQEHGN TLAALRWATD YLIKAHPEPN VLYGQVGDAN LDHACWMRPE DMTTPRPSYR IDPQHPGADL AGETAAAMAA ASLAFAPSDS
201: AYAKTLISHA KELFEFAKDY PGVYHNSIPN AGGFYPSSGY EDELLWAAAW LHRATGDQTY LDHLTQASNS GGARSVFAWD DKFLGAQVLV AKLVFEGKVK
301: NEGKMIEYKS MAEQFICNCA QKGFNNVKKT PGGLLWFLPW DNLQYTATAS FALATYAKYL EAAQTSIQCP NGDVLQASDL LNLARAQVDY ILGSNPKKMS
401: YMVGYGTNYP KRPHHRGASI VSIKNDPKPV TCNGGFEAWY NNPKPNPNLL VGAIVGGPDE YDAYGDERSD FQHGEPDTVT VAPLLGVLAA IA
101: LAWSSVEMES QLKAHQEHGN TLAALRWATD YLIKAHPEPN VLYGQVGDAN LDHACWMRPE DMTTPRPSYR IDPQHPGADL AGETAAAMAA ASLAFAPSDS
201: AYAKTLISHA KELFEFAKDY PGVYHNSIPN AGGFYPSSGY EDELLWAAAW LHRATGDQTY LDHLTQASNS GGARSVFAWD DKFLGAQVLV AKLVFEGKVK
301: NEGKMIEYKS MAEQFICNCA QKGFNNVKKT PGGLLWFLPW DNLQYTATAS FALATYAKYL EAAQTSIQCP NGDVLQASDL LNLARAQVDY ILGSNPKKMS
401: YMVGYGTNYP KRPHHRGASI VSIKNDPKPV TCNGGFEAWY NNPKPNPNLL VGAIVGGPDE YDAYGDERSD FQHGEPDTVT VAPLLGVLAA IA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.