Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G23560.1 | Thale cress | extracellular | 91.84 | 91.65 |
| CDY44116 | Canola | extracellular | 84.1 | 83.75 |
| Bra013709.1-P | Field mustard | extracellular | 84.1 | 83.75 |
| CDY10895 | Canola | extracellular | 83.05 | 82.71 |
| CDX94202 | Canola | vacuole | 80.96 | 80.62 |
| CDY10945 | Canola | extracellular, vacuole | 80.54 | 80.21 |
| Bra019296.1-P | Field mustard | extracellular, vacuole | 80.54 | 80.21 |
| VIT_02s0025g00430.t01 | Wine grape | extracellular, vacuole | 69.87 | 66.4 |
| KRH27886 | Soybean | extracellular | 68.2 | 63.8 |
| Solyc08g081620.2.1 | Tomato | extracellular | 66.53 | 63.47 |
| PGSC0003DMT400031762 | Potato | extracellular | 66.32 | 63.15 |
| TraesCS1D01G090100.1 | Wheat | extracellular | 58.16 | 55.27 |
| EES13778 | Sorghum | extracellular | 59.2 | 54.74 |
| Zm00001d032271_P001 | Maize | extracellular | 58.37 | 54.6 |
| TraesCS1B01G107700.1 | Wheat | extracellular | 57.53 | 54.35 |
| Os08t0387400-01 | Rice | extracellular | 58.58 | 54.26 |
| TraesCS1A01G088700.1 | Wheat | extracellular | 57.11 | 53.95 |
| HORVU1Hr1G019520.1 | Barley | golgi, mitochondrion, vacuole | 57.74 | 51.78 |
| AT1G02800.1 | Thale cress | extracellular, vacuole | 52.51 | 50.1 |
| AT1G71380.1 | Thale cress | extracellular | 50.21 | 49.59 |
| AT1G22880.1 | Thale cress | extracellular | 49.58 | 48.97 |
| AT2G44560.1 | Thale cress | extracellular, vacuole | 48.74 | 47.45 |
| AT4G39010.1 | Thale cress | extracellular, vacuole | 48.95 | 47.08 |
| AT4G02290.1 | Thale cress | plastid | 50.63 | 46.9 |
| AT1G70710.1 | Thale cress | vacuole | 48.12 | 46.75 |
| AT1G23210.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 47.49 | 46.42 |
| AT2G44540.1 | Thale cress | vacuole | 47.49 | 46.23 |
| AT2G44570.1 | Thale cress | extracellular | 47.49 | 46.14 |
| AT2G44550.1 | Thale cress | extracellular, plasma membrane, vacuole | 47.07 | 45.92 |
| AT3G43860.1 | Thale cress | extracellular, vacuole | 46.23 | 45.47 |
| AT4G39000.1 | Thale cress | extracellular, vacuole | 43.93 | 42.6 |
| AT2G32990.1 | Thale cress | extracellular, vacuole | 44.98 | 40.95 |
| AT4G11050.1 | Thale cress | vacuole | 48.33 | 36.9 |
| AT1G48930.1 | Thale cress | vacuole | 48.33 | 36.84 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf | EntrezGene:826560 |
| ProteinID:AEE82789.1 | ArrayExpress:AT4G09740 | EnsemblPlantsGene:AT4G09740 | RefSeq:AT4G09740 | TAIR:AT4G09740 | RefSeq:AT4G09740-TAIR-G |
| EnsemblPlants:AT4G09740.1 | TAIR:AT4G09740.1 | Unigene:At.54238 | Symbol:AtGH9B14 | ProteinID:CAB39641.1 | ProteinID:CAB78097.1 |
| GO:GO:0000272 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008810 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030245 | GO:GO:0071555 | InterPro:Glyco_hydro_9 |
| InterPro:Glyco_hydro_9_Asp/Glu_AS | InterPro:Glyco_hydro_9_His_AS | InterPro:IPR012341 | RefSeq:NP_849349.1 | PFAM:PF00759 | ScanProsite:PS00592 |
| ScanProsite:PS00698 | PANTHER:PTHR22298 | PANTHER:PTHR22298:SF22 | UniProt:Q9SZ90 | SUPFAM:SSF48208 | SignalP:SignalP-noTM |
| UniParc:UPI0000162A0B | SEG:seg | : | : | : | : |
Description
AtGH9B14Endoglucanase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ90]
Coordinates
chr4:-:6142706..6145003
Molecular Weight (calculated)
52516.5 Da
IEP (calculated)
6.402
GRAVY (calculated)
-0.244
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKLLVVMLI GMFLAFESLE ALDYGDALNK SILFFEGQRS GKLPTNQRVK WRADSGLSDG ASANVNLIGG YYDAGDNVKF VWPMSFTTTL LSWAALEYQN
101: EITFVNQLGY LRSTIKWGTN FILRAHTSTN MLYTQVGDGN SDHSCWERPE DMDTPRTLYS ISSSSPGSEA AGEAAAALAA ASLVFKLVDS TYSSKLLNNA
201: KSLFEFADKY RGSYQASCPF YCSHSGYQDE LLWAAAWLYK ATGEKSYLNY VISNKDWSKA INEFSWDNKF AGVQALLASE FYNGANDLEK FKTDVESFVC
301: ALMPGSSSQQ IKPTPGGILF IRDSSNLQYV TTATTILFYY SKTLTKAGVG SIQCGSTQFT VSQIRNFAKS QVDYILGNNP LKMSYMVGFG TKYPTQPHHR
401: GSSLPSIQSK PEKIDCNGGF SYYNFDTPNP NVHTGAIVGG PNSSDQYSDK RTDYSHAEPT TYINAAFIGS VAALISSS
101: EITFVNQLGY LRSTIKWGTN FILRAHTSTN MLYTQVGDGN SDHSCWERPE DMDTPRTLYS ISSSSPGSEA AGEAAAALAA ASLVFKLVDS TYSSKLLNNA
201: KSLFEFADKY RGSYQASCPF YCSHSGYQDE LLWAAAWLYK ATGEKSYLNY VISNKDWSKA INEFSWDNKF AGVQALLASE FYNGANDLEK FKTDVESFVC
301: ALMPGSSSQQ IKPTPGGILF IRDSSNLQYV TTATTILFYY SKTLTKAGVG SIQCGSTQFT VSQIRNFAKS QVDYILGNNP LKMSYMVGFG TKYPTQPHHR
401: GSSLPSIQSK PEKIDCNGGF SYYNFDTPNP NVHTGAIVGG PNSSDQYSDK RTDYSHAEPT TYINAAFIGS VAALISSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.