Factsheet for HORVU1Hr1G019520.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, vacuole

Predictor Summary:

mitochondrion 2
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, vacuole
Any Predictor:	golgi, mitochondrion, vacuole
iPSORT:	mitochondrion
MultiLoc:	vacuole
TargetP:	mitochondrion
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23560.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G107700.1	Wheat	extracellular	89.12	93.87
TraesCS1A01G088700.1	Wheat	extracellular	89.12	93.87
TraesCS1D01G090100.1	Wheat	extracellular	88.18	93.44
Os08t0387400-01	Rice	extracellular	75.05	77.52
Zm00001d032271_P001	Maize	extracellular	70.73	73.78
EES13778	Sorghum	extracellular	71.48	73.69
Bra013709.1-P	Field mustard	extracellular	53.1	58.96
CDX94202	Canola	vacuole	53.1	58.96
CDY44116	Canola	extracellular	53.1	58.96
AT4G23560.1	Thale cress	extracellular	52.91	58.87
Bra019296.1-P	Field mustard	extracellular, vacuole	52.91	58.75
CDY10945	Canola	extracellular, vacuole	52.91	58.75
CDY10895	Canola	extracellular	52.72	58.54
VIT_02s0025g00430.t01	Wine grape	extracellular, vacuole	54.78	58.05
AT4G09740.1	Thale cress	extracellular	51.78	57.74
KRH27886	Soybean	extracellular	54.22	56.56
PGSC0003DMT400031762	Potato	extracellular	53.1	56.37
Solyc08g081620.2.1	Tomato	extracellular	52.91	56.29
HORVU5Hr1G052830.1	Barley	endoplasmic reticulum, extracellular	45.97	49.3
HORVU1Hr1G079980.3	Barley	extracellular, vacuole	47.09	47.9
HORVU7Hr1G075970.1	Barley	endoplasmic reticulum, extracellular, vacuole	44.09	47.47
HORVU7Hr1G041610.1	Barley	vacuole	44.65	47.41
HORVU6Hr1G073570.3	Barley	extracellular	43.34	46.48
HORVU1Hr1G015550.1	Barley	vacuole	41.65	45.31
HORVU2Hr1G077130.1	Barley	extracellular, vacuole	42.03	44.89
HORVU5Hr1G081200.5	Barley	vacuole	42.78	44.27
HORVU7Hr1G029660.1	Barley	extracellular, mitochondrion, vacuole	42.78	42.86
HORVU6Hr1G022300.1	Barley	extracellular, mitochondrion, plastid, vacuole	10.69	42.54
HORVU7Hr1G029680.1	Barley	peroxisome, vacuole	43.15	42.12
HORVU0Hr1G023830.2	Barley	vacuole	43.15	41.37
HORVU6Hr1G081500.1	Barley	plastid	40.15	41.07
HORVU6Hr1G022270.2	Barley	mitochondrion	41.84	40.77
HORVU7Hr1G040680.3	Barley	vacuole	41.09	39.18
HORVU3Hr1G029470.2	Barley	endoplasmic reticulum, extracellular, vacuole	43.53	37.24
HORVU2Hr1G120100.1	Barley	extracellular	42.21	36.53
HORVU1Hr1G085830.2	Barley	vacuole	40.9	34.94
HORVU5Hr1G060140.1	Barley	vacuole	37.52	34.6

Protein Annotations

EnsemblPlants:HORVU1Hr1G019520.1	EnsemblPlantsGene:HORVU1Hr1G019520	Gene3D:1.50.10.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
InterPro:Glyco_hydro_9	InterPro:IPR012341	KEGG:00500+3.2.1.4	PANTHER:PTHR22298	PANTHER:PTHR22298:SF22	PFAM:PF00759
SEG:seg	SUPFAM:SSF48208	UniParc:UPI000B476577	UniProt:A0A287ETE7	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr1H:+:73823183..73825878

Molecular Weight (calculated)

57772.9 Da

IEP (calculated)

7.168

GRAVY (calculated)

-0.285

Length

533 amino acids

Sequence
(BLAST)

001: TTRRKRKTDT YTLHMHIVCK LQHRQMVTMA VKVWVVAMML MHHCFDVGLG DAGGDGLCLG SPDYGDALAK AILFFEGQRS GRLPANQRVQ WRGNSALADG
101: RPENVNLTGG YYDAGDNVKF GFPMAFTVTL LSWSAIEFRG DVAAVGQLGN LRAAIHWGAD FLLRAHTSPT TLYTQVGDGN ADHGCWERPE DMDTPRTLYK
201: ITADSPGSEV AGEAAAALAA AYLVLKEDGD KAFASRLLAA SKSLFELANN YRGSFQSSCP FYCSYSGYQD ELLWASAWLH RATRDGKYLD FLRQNQGSSN
301: PGNEFSWDNK QVGAQMLATQ EYLKGRRDLA RYKANLDSFV CALMPDSGGT QIRTTRGGLL FTRDSVNMQY ATTAALVLSV YSKTLRSWGG SDGVRCSAAS
401: FSPDQIASFA ASQVDYVLGS NPMGMSYMVG HGDAFPRRIH HRASSIPSVE VLSRAVPCNE GFSSWLPTSD PNPNVHVGAI VGGPDENDQF GDNRGDSAHS
501: EPATYINAAF VGACAAAMGQ SQKPASPTLS TYK

Best Arabidopsis Sequence Match ( AT4G23560.1 )
(BLAST)

001: MGKLLVLMLV GMFLAFESLE ALEYGDALNK SILFFEGQRS GKLPTNQRVK WRADSALSDG SLANVNLIGG YYDAGDNVKF VWPMSFTTTL LSWAAIEYQN
101: EISSVNQLGY LRSTIKWGTD FILRAHTSPN MLYTQVGDGN SDHSCWERPE DMDTSRTLYS ISSSSPGSEA AGEAAAALAA ASLVFKSVDS TYSSTLLNHA
201: KTLFEFADKY RGSYQASCPF YCSYSGYQDE LLWAAAWLYK ATGDKIYINY VISNKDWSQA VNEFSWDNKF VGAQALLVSE FYNGANDLAK FKSDVESFVC
301: AMMPGSSSQQ IKPTPGGLLF IRDSSNLQYV TTATTVLFHY SKTLTKAGVG SIQCGSTKFT VSQIRNFAKS QVDYILGNNP MKMSYMVGFG TKYPTQPHHR
401: GSSLPSIQSK PEKIDCNGGY SYYNSDTPNP NVHIGAIVGG PNSSDQYSDK KSDYSHAEPT TYINAAFIGP VAALISSSG

Arabidopsis Description

AtGH9B15Endoglucanase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUS0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.