CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24186	Soybean	extracellular, vacuole	96.17	95.87
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	71.13	72.52
PGSC0003DMT400051238	Potato	extracellular	70.81	70.25
Solyc02g014220.2.1	Tomato	extracellular	69.7	69.15
CDY59895	Canola	cytosol, vacuole	53.91	66.67
CDY60076	Canola	extracellular	25.68	66.53
Bra032270.1-P	Field mustard	extracellular	64.43	66.34
Bra018765.1-P	Field mustard	vacuole	65.55	65.87
CDX93707	Canola	vacuole	65.55	65.87
CDY60075	Canola	vacuole	65.39	65.5
CDY65179	Canola	extracellular	65.39	65.5
AT1G48930.1	Thale cress	vacuole	65.39	65.39
GSMUA_Achr2P03770_001	Banana	vacuole	60.13	61.9
EES13091	Sorghum	vacuole	58.21	57.94
Zm00001d026605_P001	Maize	vacuole	57.26	57.44
KRH14764	Soybean	cytosol, nucleus, vacuole	37.0	57.14
Os04t0674800-01	Rice	extracellular	55.98	56.16
KRH73794	Soybean	vacuole	46.09	56.12
KRH73374	Soybean	vacuole	46.41	55.53
TraesCS2D01G557500.1	Wheat	extracellular	54.55	55.43
TraesCS2B01G586600.1	Wheat	extracellular	53.43	54.56
HORVU2Hr1G120100.1	Barley	extracellular	53.59	54.55
KRH14332	Soybean	vacuole	46.25	54.51
TraesCS2A01G556300.1	Wheat	vacuole	54.39	52.87
KRG89135	Soybean	extracellular	38.76	50.1
KRH60035	Soybean	nucleus	49.76	50.0
KRH41305	Soybean	nucleus	49.6	49.76
KRH41678	Soybean	nucleus	37.16	47.45
KRH60381	Soybean	nucleus	37.16	47.36
KRH68213	Soybean	nucleus	36.84	46.2
KRH62487	Soybean	extracellular, vacuole	35.57	46.07
KRH56424	Soybean	extracellular, vacuole	35.41	45.87
KRH31855	Soybean	nucleus	36.84	45.74
KRH69273	Soybean	extracellular, vacuole	36.84	45.56
KRG97785	Soybean	extracellular	36.2	45.04
KRH60771	Soybean	extracellular, vacuole	35.25	45.01
KRH27886	Soybean	extracellular	36.68	45.01
KRG96467	Soybean	extracellular, vacuole	29.82	44.95
KRH52260	Soybean	extracellular, vacuole	34.45	44.72
KRH51463	Soybean	extracellular	34.93	44.33
KRH52262	Soybean	extracellular, vacuole	34.13	44.31
KRH29353	Soybean	extracellular, vacuole	34.77	43.43
KRH23799	Soybean	extracellular, nucleus, vacuole	28.55	43.03
KRH55742	Soybean	vacuole	33.33	43.0
KRH39987	Soybean	extracellular, vacuole	33.65	42.71
KRH23800	Soybean	extracellular, vacuole	33.65	42.45

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100812170	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
EMBL:ACUP02006787	InterPro:CBM_49	EnsemblPlantsGene:GLYMA_11G101300	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	GO:GO:0030246
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	UniProt:I1LIS9	InterPro:IPR012341	EnsemblPlants:KRH29156	ProteinID:KRH29156
ProteinID:KRH29156.1	PFAM:PF00759	PFAM:PF09478	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF41
MetaCyc:PWY-6788	SMART:SM01063	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI00029516FB	SEG:seg

Description

hypothetical protein

Coordinates

chr11:+:7652060..7656731

Molecular Weight (calculated)

69206.3 Da

IEP (calculated)

6.199

GRAVY (calculated)

-0.295

Length

627 amino acids

Sequence
(BLAST)

001: MNLNISLCML LIALVLRLGG SAPSGFNYGD ALDKSLMFFE AQRSGKLPLQ QRVKWRGDSG LQDGFQQRVD LVGGYYDAGD HVKFGLPMAY SVTMLAWGAI
101: EFNKEITDLN QMGHALWAIK WGTDYFIKAH TQPNVLWGQV GDGVSDHYCW ERAEDMTTSR GAYKIDEQHP GSDLAGETAA ALAAAAIAFR PYNSSYSNLL
201: LVHAKQLFTF ADRFRGLYDN SISSAQQFYT SSGYSDELLW AATWLHLATG NEYYIKYVVD NAVYMGGTGW AVKEFSWDNK YAGVQILLSK VLLEGKAGAY
301: SATLKQYQAK AEYFTCACLQ KNDDYNVQKT PGGLLYVREW NNMQYVSSAA FLLAVYSNYL SATKSQLNCP DGQTQPQELL NFVKSQADYI LGKNPADVSY
401: LVGYGAKYPL HVHHRGASIA SVFALHYDVG CTQGFEMWYN RAEPNPNVIC GGLVGGPDKN DDFSDERSNY EQTEPTISGS APLVGIFAKL QSLYGNIGEG
501: YNHNESPVPQ QKTPSTNPGK TTMSKTSSES EGAPVEFLHS ISSSWTVGGA TYYHHRVIIK NTSSKPISDL KLVIKDLSGS LWGLSPTEEK DTYELPQWNK
601: VLNPGSECIF VYVQGGPQAT VSIKSLH

Best Arabidopsis Sequence Match ( AT1G48930.1 )
(BLAST)

001: MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNRKELS SSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE TAAALAAASL AFKPFNSSYS
201: ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG
301: GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG
401: MSYVVGYGPK YPIRVHHRGS SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL SGTAPLVGLF AKLYGGSLGS
501: YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK
601: TLRAGQAYDF VYVQGGPQAK VSVLSYN

Arabidopsis Description

AtGH9C1Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.