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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000357.1-P
Bra000358.1-P
Bra001301.1-P
Bra001340.1-P
Bra001962.1-P
Bra002880.1-P
Bra003012.1-P
Bra003294.1-P
Bra003946.1-P
Bra004249.1-P
Bra004300.1-P
Bra004420.1-P
Bra004852.1-P
Bra004853.1-P
Bra004855.1-P
Bra005852.1-P
Bra006382.1-P
Bra007345.1-P
Bra007733.1-P
Bra008229.1-P
Bra008580.1-P
Bra008661.1-P
Bra008756.1-P
Bra009112.1-P
Bra009182.1-P
Bra009665.1-P
Bra009683.1-P
Bra010432.1-P
Bra010705.1-P
Bra010869.1-P
Bra010919.1-P
Bra010950.1-P
Bra010951.1-P
Bra011768.1-P
Bra012747.1-P
Bra013810.1-P
Bra013811.1-P
Bra013873.1-P
Bra014057.1-P
Bra014190.1-P
Bra014239.1-P
Bra014273.1-P
Bra014335.1-P
Bra014336.1-P
Bra014533.1-P
Bra014558.1-P
Bra014869.1-P
Bra014964.1-P
Bra015172.1-P
Bra015563.1-P
Bra015678.1-P
Bra016192.1-P
Bra016284.1-P
Bra016718.1-P
Bra016719.1-P
Bra016797.1-P
Bra017181.1-P
Bra017223.1-P
Bra018446.1-P
Bra018821.1-P
Bra018911.1-P
Bra019183.1-P
Bra019223.1-P
Bra019736.1-P
Bra019828.1-P
Bra020158.1-P
Bra021161.1-P
Bra021162.1-P
Bra021317.1-P
Bra021487.1-P
Bra021681.1-P
Bra022433.1-P
Bra023593.1-P
Bra023598.1-P
Bra024691.1-P
Bra025380.1-P
Bra026415.1-P
Bra027078.1-P
Bra027189.1-P
Bra028150.1-P
Bra028320.1-P
Bra028455.1-P
Bra028736.1-P
Bra028759.1-P
Bra028932.1-P
Bra028970.1-P
Bra029250.1-P
Bra029588.1-P
Bra029708.1-P
Bra029783.1-P
Bra030248.1-P
Bra030271.1-P
Bra031402.1-P
Bra031558.1-P
Bra032761.1-P
Bra032908.1-P
Bra033089.1-P
Bra033944.1-P
Bra035006.1-P
Bra035582.1-P
Bra035890.1-P
Bra036691.1-P
Bra037210.1-P
Bra037296.1-P
Bra037639.1-P
Bra037640.1-P
Bra038217.1-P
Bra038534.1-P
Bra039117.1-P
Bra039138.1-P
Bra039167.1-P
Bra040427.1-P
Bra040518.1-P
Bra040749.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G26630.1 Bra015563.1-P AT1G07220.1 25387881
AT4G26630.1 Bra031558.1-P AT1G07220.1 25387881
AT4G26630.1 Bra018446.1-P AT1G10320.1 25387881
AT4G26630.1 Bra016797.1-P AT1G12030.1 25387881
AT4G26630.1 Bra019736.1-P AT1G12030.1 25387881
AT4G26630.1 Bra019828.1-P AT1G13380.1 25387881
AT4G26630.1 Bra016718.1-P AT1G13930.1 25387881
AT4G26630.1 Bra016719.1-P AT1G13930.1 25387881
AT4G26630.1 Bra010950.1-P AT1G24300.1 25387881
AT4G26630.1 Bra010951.1-P AT1G24300.1 25387881
AT4G26630.1 Bra010919.1-P AT1G27752.1 25387881
AT4G26630.1 Bra010869.1-P AT1G28420.1 25387881
AT4G26630.1 Bra032908.1-P AT1G28420.1 25387881
AT4G26630.1 Bra016284.1-P AT1G35350.1 25387881
AT4G26630.1 Bra024691.1-P AT1G35350.1 25387881
AT4G26630.1 Bra014057.1-P AT1G47128.1 25387881
AT4G26630.1 Bra040749.1-P AT1G47128.1 25387881
AT4G26630.1 Bra014190.1-P AT1G49470.1 25387881
AT4G26630.1 Bra018821.1-P AT1G49980.1 25387881
AT4G26630.1 Bra014239.1-P AT1G50140.1 25387881
AT4G26630.1 Bra014273.1-P AT1G51310.1 25387881
AT4G26630.1 Bra018911.1-P AT1G51460.1 25387881
AT4G26630.1 Bra021317.1-P AT1G61730.1 25387881
AT4G26630.1 Bra027078.1-P AT1G61730.1 25387881
AT4G26630.1 Bra031402.1-P AT1G61730.1 25387881
AT4G26630.1 Bra004249.1-P AT1G67720.1 25387881
AT4G26630.1 Bra004300.1-P AT1G68360.1 25387881
AT4G26630.1 Bra033944.1-P AT1G68360.1 25387881
AT4G26630.1 Bra003946.1-P AT1G70710.1 25387881
AT4G26630.1 Bra016192.1-P AT1G70710.1 25387881
AT4G26630.1 Bra008229.1-P AT1G75920.1 25387881
AT4G26630.1 Bra014533.1-P AT1G75920.1 25387881
AT4G26630.1 Bra015678.1-P AT1G77300.1 25387881
AT4G26630.1 Bra014335.1-P AT2G01240.1 25387881
AT4G26630.1 Bra014336.1-P AT2G01240.1 25387881
AT4G26630.1 Bra015172.1-P AT2G05920.1 25387881
AT4G26630.1 Bra029783.1-P AT2G06990.1 25387881
AT4G26630.1 Bra037210.1-P AT2G13560.1 25387881
AT4G26630.1 Bra037296.1-P AT2G16600.1 25387881
AT4G26630.1 Bra009665.1-P AT2G17110.1 25387881
AT4G26630.1 Bra036691.1-P AT2G20208.1 25387881
AT4G26630.1 Bra030248.1-P AT2G22300.1 25387881
AT4G26630.1 Bra038534.1-P AT2G22300.1 25387881
AT4G26630.1 Bra017223.1-P AT2G36810.1 25387881
AT4G26630.1 Bra017181.1-P AT2G37520.1 25387881
AT4G26630.1 Bra014558.1-P AT2G42740.1 25387881
AT4G26630.1 Bra000357.1-P AT2G44640.1 25387881
AT4G26630.1 Bra004852.1-P AT2G44640.1 25387881
AT4G26630.1 Bra004853.1-P AT2G44650.1 25387881
AT4G26630.1 Bra037640.1-P AT2G44650.1 25387881
AT4G26630.1 Bra000358.1-P AT2G44670.1 25387881
AT4G26630.1 Bra004855.1-P AT2G44670.1 25387881
AT4G26630.1 Bra037639.1-P AT2G44670.1 25387881
AT4G26630.1 Bra032761.1-P AT2G47430.1 25387881
AT4G26630.1 Bra004420.1-P AT2G47980.1 25387881
AT4G26630.1 Bra021487.1-P AT3G01180.1 25387881
AT4G26630.1 Bra039138.1-P AT3G01180.1 25387881
AT4G26630.1 Bra039117.1-P AT3G01460.1 25387881
AT4G26630.1 Bra040518.1-P AT3G01460.1 25387881
AT4G26630.1 Bra039167.1-P AT3G02260.1 25387881
AT4G26630.1 Bra029588.1-P AT3G06560.1 25387881
AT4G26630.1 Bra029708.1-P AT3G08670.1 25387881
AT4G26630.1 Bra001301.1-P AT3G09670.1 25387881
AT4G26630.1 Bra021161.1-P AT3G16130.1 25387881
AT4G26630.1 Bra021162.1-P AT3G16130.1 25387881
AT4G26630.1 Bra027189.1-P AT3G16130.1 25387881
AT4G26630.1 Bra022433.1-P AT3G19553.1 25387881
AT4G26630.1 Bra038217.1-P AT3G19553.1 25387881
AT4G26630.1 Bra014964.1-P AT3G24180.1 25387881
AT4G26630.1 Bra028320.1-P AT3G24180.1 25387881
AT4G26630.1 Bra025380.1-P AT3G29170.1 25387881
AT4G26630.1 Bra033089.1-P AT3G29170.1 25387881
AT4G26630.1 Bra021681.1-P AT3G44310.1 25387881
AT4G26630.1 Bra023598.1-P AT3G44310.1 25387881
AT4G26630.1 Bra028932.1-P AT3G44310.1 25387881
AT4G26630.1 Bra035006.1-P AT3G44310.1 25387881
AT4G26630.1 Bra003294.1-P AT3G57660.1 25387881
AT4G26630.1 Bra007345.1-P AT3G57660.1 25387881
AT4G26630.1 Bra007733.1-P AT3G63190.1 25387881
AT4G26630.1 Bra040427.1-P AT3G63190.1 25387881
AT4G26630.1 Bra014869.1-P AT4G11810.1 25387881
AT4G26630.1 Bra012747.1-P AT4G15960.1 25387881
AT4G26630.1 Bra013810.1-P AT4G24520.1 25387881
AT4G26630.1 Bra013811.1-P AT4G24520.1 25387881
AT4G26630.1 Bra019223.1-P AT4G24520.1 25387881
AT4G26630.1 Bra013873.1-P AT4G25210.1 25387881
AT4G26630.1 Bra019183.1-P AT4G25210.1 25387881
AT4G26630.1 Bra010432.1-P AT4G26630.1 25387881
AT4G26630.1 Bra026415.1-P AT4G26630.1 25387881
AT4G26630.1 Bra011768.1-P AT4G37460.1 25387881
AT4G26630.1 Bra010705.1-P AT4G39100.1 25387881
AT4G26630.1 Bra001340.1-P AT5G01570.1 25387881
AT4G26630.1 Bra001962.1-P AT5G01570.1 25387881
AT4G26630.1 Bra005852.1-P AT5G05410.1 18552202
AT4G26630.1 Bra009112.1-P AT5G05410.1 18552202
AT4G26630.1 Bra028759.1-P AT5G05410.1 18552202
AT4G26630.1 Bra009182.1-P AT5G06300.1 25387881
AT4G26630.1 Bra028736.1-P AT5G06300.1 25387881
AT4G26630.1 Bra008756.1-P AT5G14460.1 25387881
AT4G26630.1 Bra008661.1-P AT5G15970.1 25387881
AT4G26630.1 Bra006382.1-P AT5G17020.1 25387881
AT4G26630.1 Bra008580.1-P AT5G17020.1 25387881
AT4G26630.1 Bra023593.1-P AT5G17020.1 25387881
AT4G26630.1 Bra009683.1-P AT5G23430.1 25387881
AT4G26630.1 Bra028150.1-P AT5G37790.1 25387881
AT4G26630.1 Bra028455.1-P AT5G40340.1 25387881
AT4G26630.1 Bra030271.1-P AT5G44220.1 25387881
AT4G26630.1 Bra003012.1-P AT5G54140.1 25387881
AT4G26630.1 Bra020158.1-P AT5G54140.1 25387881
AT4G26630.1 Bra028970.1-P AT5G55580.1 25387881
AT4G26630.1 Bra002880.1-P AT5G55660.1 25387881
AT4G26630.1 Bra035582.1-P AT5G55660.1 25387881
AT4G26630.1 Bra029250.1-P AT5G62560.1 25387881
AT4G26630.1 Bra035890.1-P AT5G62560.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89318 Canola nucleus 77.13 91.48
AT4G26630.1 Thale cress nucleus 50.54 55.31
VIT_19s0015g00430.t01 Wine grape nucleus 34.01 47.41
Bra035582.1-P Field mustard nucleus 39.28 41.31
KRG98507 Soybean nucleus 36.17 41.09
Bra002880.1-P Field mustard endoplasmic reticulum 42.16 40.69
PGSC0003DMT400037344 Potato endoplasmic reticulum, vacuole 16.53 39.66
KRH46360 Soybean nucleus 34.73 39.19
Solyc07g065490.2.1 Tomato nucleus 29.58 38.96
PGSC0003DMT400057390 Potato extracellular, nucleus 30.54 37.34
Solyc10g006000.2.1 Tomato nucleus 23.95 36.1
KRH46364 Soybean nucleus 34.73 35.94
KRG98502 Soybean nucleus 31.26 35.75
Bra010432.1-P Field mustard nucleus 48.26 35.63
Bra029213.1-P Field mustard nucleus 11.74 34.75
Bra027748.1-P Field mustard nucleus 7.07 33.52
Bra019559.1-P Field mustard nucleus 15.81 31.58
EER91265 Sorghum nucleus 22.75 29.46
Bra038644.1-P Field mustard nucleus 17.13 29.18
Os03t0596900-01 Rice nucleus 24.55 29.16
Bra035837.1-P Field mustard nucleus 19.04 28.96
Zm00001d033159_P001 Maize nucleus 15.45 28.86
Zm00001d013757_P010 Maize nucleus 22.04 28.18
TraesCS4B01G148100.1 Wheat nucleus 22.16 19.03
HORVU4Hr1G035250.1 Barley nucleus 22.04 18.57
TraesCS4A01G137900.1 Wheat nucleus 21.56 18.4
TraesCS4D01G153300.1 Wheat nucleus 21.68 18.06
OQU91413 Sorghum nucleus 18.92 11.7
Protein Annotations
EnsemblPlants:Bra026415.1EnsemblPlants:Bra026415.1-PEnsemblPlantsGene:Bra026415Gene3D:1.10.10.60InterPro:DEK_Cncoils:Coil
PANTHER:PTHR13468PANTHER:PTHR13468:SF8PFAM:PF08766SEG:segSUPFAM:SSF109715UniParc:UPI0002545564
UniProt:M4ECA6MapMan:35.2::::
Description
AT4G26630 (E=3e-130) | EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55660.1); Has 253164 Blast hits to 95130 proteins in 2571 species: Archae - 852; Bacteria - 27744; Metazoa - 108483; Fungi - 29060; Plants - 10256; Viruses - 1718; Other Eukaryotes - 75051 (source: NCBI BLink).
Coordinates
chrA01:-:9424930..9428617
Molecular Weight (calculated)
92452.7 Da
IEP (calculated)
4.724
GRAVY (calculated)
-1.507
Length
835 amino acids
Sequence
(BLAST)
001: MQPLVRMGEE DSKAAVEPTA TKTTSLEKPS EAVAGNKEEN AGGKETQEVK KGEEKAEPEK MEIDAEAEKM EEDASVTKDE GQAEATNMDE DEDADGKKKQ
101: TDDGVSGGGK VKDTVMKENV ESKDSDNVKD DEKQETKDAA DHKKAGKESE EDVKDEGEKA NGTKQEEEKL VDGDKGTENT ENVETVDEDK EVQTVEEDPK
201: VETVDEKEKE DSAKEQNEEG LVEEEKEVEE DKIEKVEEGT VKDEDDKEDE KEEIKDDKED EKAESGDDKE DEKEESKGSK KRGKGKSSGK KVNEKTKKDT
301: EPKTPFSDRP VRERKSVERL VAVIDRDSSK EFHIEKGKGA YLKDIPNVAY KVTRKKSDEI LKLLHTILFA RRGKAAQIKT NILGFSGFVW HGNEEKAREK
401: IKEKLDKCNK EKLWEFCDVF DIHVSKATTK KEDIITKLIE FLEKPHVKSD VAANEKDKSS TGAKRKRTPK QSSPAAGSSS SKRSAKRKRK SGEGTKAAKK
501: ILADSEDESE EEKEEEEKEK NAEEEVKNKE EENENGIPDK SEDEAPQPSE SDEKDDSEEH SEEETPKKKR RSKVSAGKKE SAGRARSKKP AVAAKSSPPE
601: KVTQKRSSAK RKKTDDDSDA SPKASSKRKK SEKATKAPAP SKEKPEVKSA GKGKEKTKGP SDKVLKKAIV EILKRVDFNT ATFTDILKEL GKDFKEDLTP
701: RKSSIKVMIQ SELTKLAEEV DEQEEVEKKK EDDAEKEKAV GSASAEEEEE KKEENAEKEE KEKAGGSAVA EEVKEGDHGE KEKAGGSTGA EEEKKEESAE
801: KEKAGGSTGA EEVKKGDYAE KEKAGGSAGA EEVKA
Best Arabidopsis Sequence Match ( AT4G26630.1 )
(BLAST)
001: MGEDTKATIE PTANKTTSLE KPSEAMAGKE NAGGKETQEL AKDEDMAEPD NMEIDAQIKK DDEKAETEDK ESEVKKNEDN AETQKMEEKV EVTKDEGQAE
101: ATNMDEDADG KKEQTDDGVS VEDTVMKENV ESKDNNYAKD DEKETKETDI TEADHKKAGK EDIQHEADKA NGTKDGNTGD IKEEGTLVDE DKGTDMDEKV
201: ENGDENKQVE NVEGKEKEDK EENKTKEVEA AKAEVDESKV EDEKEGSEDE NDNEKVESKD AKEDEKEETN DDKEDEKEES KGSKKRGKGT SSGGKVREKN
301: KTEEVKKDAE PRTPFSDRPV RERKSVERLV ALIDKDSSKE FRVEKGRGAY LKDIPNVANK VMRKRSDETL KLLHPILFGG RRGKAAQIKT NILGFSGFVW
401: HGDEKKAKEK VKEKLEKCTK EKLWEFCDVL DIHITKATTK KEDIITKLFE FLEKPHVTGD VTGDTTVSEK EKSSKGAKRK RTPKKTSPTA GSSSSKRSAK
501: SQKKSEEATK VVKKSLAHSD DESEEEKEEE EKQEEEKAEE KEEKKEEENE NGIPDKSEDE APQPSESEEK DESEEHSEEE TTKKKRGSRL SAGKKESAGR
601: ARNKKAVVAA KSSPPEKITQ KRSSAKRKKT DDDSDTSPKA SSKRKKSENP IKASPAPSKS ASKEKPVKRA GKGKDKPSDK VLKNAIVEIL KRVDFSTATF
701: TDILKELAKE FTEDLTPRKS SIKMIIQEEL TKLADEEEEE EKKEEDSEKE EAGGSGGGEE VKA
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:Q9SUA1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.