Factsheet for Bra018911.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22844	Canola	plastid	99.05	99.05
AT1G51460.1	Thale cress	plasma membrane	88.25	82.01
VIT_06s0061g00260.t01	Wine grape	cytosol	65.56	60.56
KRH24072	Soybean	cytosol, peroxisome, plasma membrane	63.65	58.28
KRH29043	Soybean	cytosol, peroxisome, plasma membrane	63.65	57.95
GSMUA_Achr4P00390_001	Banana	plasma membrane	56.83	57.84
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	59.84	54.8
Bra031249.1-P	Field mustard	peroxisome	59.21	53.98
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	58.57	53.63
Zm00001d010426_P001	Maize	plastid	58.73	53.62
Bra030437.1-P	Field mustard	nucleus, peroxisome, plasma membrane	58.89	53.61
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	57.14	52.25
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	56.98	52.1
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	56.98	52.1
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	56.98	52.1
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	57.78	52.0
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	49.21	44.22
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.14	43.93
GSMUA_Achr4P00380_001	Banana	plastid	56.03	42.58
Bra011981.1-P	Field mustard	plastid	31.75	27.32
Bra034385.1-P	Field mustard	plastid	28.25	25.83
Bra038121.1-P	Field mustard	plasma membrane	23.02	13.76
Bra039668.1-P	Field mustard	plasma membrane	22.38	12.98
Bra005224.1-P	Field mustard	plasma membrane	20.95	12.79
Bra039669.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.86	12.73
Bra028945.1-P	Field mustard	plasma membrane	22.22	12.21

Protein Annotations

MapMan:21.9.4.2	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra018911	EnsemblPlants:Bra018911.1	EnsemblPlants:Bra018911.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0009506	GO:GO:0009628	GO:GO:0009651	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0080051	GO:GO:0080172	InterPro:IPR003439
UniProt:M4DQW8	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF186	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000253E9F1

Description

AT1G51460 (E=0.0) | ABC transporter family protein

Coordinates

chrA06:+:1309463..1313797

Molecular Weight (calculated)

70258.9 Da

IEP (calculated)

9.692

GRAVY (calculated)

0.152

Length

630 amino acids

Sequence
(BLAST)

001: MGPSGSGKST LLDALAGRLA GNVVMSGKVL VNGKKRRLDF GTSAYVTQED VLLGTLTVRE SIAYSAHLRL PSKLSRKQIT DIVEATITDM GLQECSDRTI
101: GNWHMRGISG GEKKRLSIAL EVLTKPSLLF LDEPTSGLDS ASAFFVVQIL RNIASNGKTV ISSIHQPSGE VFALFDDLLL LSGGETVYFG EAKFATKFFG
201: EAGFPCPSRR NPSDHFLRCV NSDFDGITAT VVESRRIHDS SFSLYQETSN TLDPFDNMPT AEIRTRLVRK FKCSEYAVAS RARIQEITSI KGLVTERNNA
301: SQTSWWKQLR VLTQRSFINM SRDLGYYWIR IGVYILLSIC VGSVFFNVGR NHTNVMNTAA CGGFMAGFMT IMSIGGFQSF IEEMKVFSRE RLNGHYGVAV
401: YTVSNFLSSL PFIILMCLGT TSITNYMVKF QPSASHFFYS CLDLISAIAT VESCMMMIAS MVPNFLMGVI IGAGYIGVMI LSAGFFRLFP DLPMVFWRYP
501: VSYINYGAWA LQGAFKNEMI GVEYNSPLPL VPKMKGELIL ETVLGINPAQ SKWLDLGVVL MILVAYRLLF FAILKFREKV FPLIHMLYTK RTLSYIQKRP
601: SFRRMSPFPS KRHNVHHALS SQEGLNSPLH

Best Arabidopsis Sequence Match ( AT1G51460.1 )
(BLAST)

001: MTTPEGAMYV AWEDLTVVIP NFGEGATKRL LNGVNGCGEP NRILAIMGPS GSGKSTLLDA LAGRLAGNVV MSGKVLVNGK KRRLDFGAAA YVTQEDVLLG
101: TLTVRESISY SAHLRLPSKL TREEISDIVE ATITDMGLEE CSDRTIGNWH LRGISGGEKK RLSIALEVLT KPSLLFLDEP TSGLDSASAF FVVQILRNIA
201: SSGKTVVSSI HQPSGEVFAL FDDLLLLSGG ETVYFGEAES ATKFFGEAGF PCPSRRNPSD HFLRCVNSDF DNVTAALVES RRINDSSFSL HQLHETTNTL
301: DPLDDIPTAE IRTTLVRKFK CSLYAAASRA RIQEIASIVG IVTERKKGSQ TNWWKQLRIL TQRSFINMSR DLGYYWMRIA VYIVLSICVG SIFFNVGRNH
401: TNVMSTAACG GFMAGFMTFM SIGGFQSFIE EMKVFSRERL NGHYGVAVYT VSNLLSSLPF IILMCLSTSS ITIYMVRFQS GGSHFFYNCL DLICAITTVE
501: SCMMMIASVV PNFLMGVMLG AGYIGIMVLS AGFFRFFPDL PMVFWRYPVS YINYGAWALQ GAYKNEMIGV EYDSPLPLVP KMKGELILQT VLGINPESSK
601: WLDLAVVMMI LIGYRIAFFA ILKFREKVFP VIHMLYTKRT LSHIQKRPSF RRMTPFPSRR YPVHHALSSQ EGLNSPLH

Arabidopsis Description

ABCG13ABC transporter G family member 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8J8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.