Factsheet for Bra034385.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77150	Canola	plastid	95.94	90.55
AT2G28070.1	Thale cress	plastid	90.86	85.75
Bra011981.1-P	Field mustard	plastid	91.0	85.66
KRG89865	Soybean	plastid	53.27	74.9
Solyc06g074970.1.1	Tomato	plastid	64.59	73.92
VIT_06s0061g00350.t01	Wine grape	plastid	77.21	73.68
KRH22852	Soybean	cytosol, plastid	76.92	73.2
PGSC0003DMT400050589	Potato	plastid	76.63	73.03
KRH26514	Soybean	plasma membrane, plastid	76.34	72.65
Solyc11g069710.1.1	Tomato	plastid	76.2	72.61
PGSC0003DMT400031312	Potato	plastid	74.31	70.82
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	67.05	63.29
EER90467	Sorghum	cytosol, plasma membrane, plastid	62.12	59.28
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	61.54	58.56
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	61.25	58.37
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	61.1	57.91
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	60.09	57.58
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	61.54	39.33
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.79	32.4
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.2	30.67
Bra031249.1-P	Field mustard	peroxisome	28.88	28.8
Bra030437.1-P	Field mustard	nucleus, peroxisome, plasma membrane	28.88	28.76
Bra018911.1-P	Field mustard	plastid	25.83	28.25
Bra038121.1-P	Field mustard	plasma membrane	19.88	13.0
Bra039668.1-P	Field mustard	plasma membrane	20.03	12.71
Bra005224.1-P	Field mustard	plasma membrane	18.72	12.5
Bra028945.1-P	Field mustard	plasma membrane	19.74	11.86
Bra039669.1-P	Field mustard	cytosol, peroxisome, plasma membrane	19.01	11.58

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	EnsemblPlantsGene:Bra034385
EnsemblPlants:Bra034385.1	EnsemblPlants:Bra034385.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	UniProt:M4EZZ2	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF200	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002543C54
SEG:seg	:	:	:	:	:

Description

AT2G28070 (E=1e-160) | ABC transporter family protein

Coordinates

chrA04:+:12262621..12271243

Molecular Weight (calculated)

76154.4 Da

IEP (calculated)

8.717

GRAVY (calculated)

0.176

Length

689 amino acids

Sequence
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLT QPISFEDSPD WEDTDDADVR MDEEANTGGG GDSINDATAT PISPSLSKIN SGSMTSPPVV
101: PEGGGGNAVR KIAGASITWK DLTVTMKGKR RYSDKVVKSS NGYALPGTMT VIMGPAKSGK STLLRALAGR LPPSAKMYGD VFVNGSKSHM PYGSYGYVER
201: ETQLIGSLTV REFLYYSPLL QLPGFLCQKS SVVEDAIQAM SLSDYANKLI GGGDCYIDRR VSIARELVMR PHILFIDEPL YHLDSVSTLL MMVTLKKLAS
301: MGCTLVFTIY QSSKKCLHFS NAGFPCPIMQ SPSDHFLRAI NTDFDRIIAM CKNWQDDNGD FSAVNMDTAV AIRTLEATYK SSADAASVET MIFKLTEREG
401: SQLKSKGKAG AATRVAVLTW RSLLVMSREW KYYWLRLILY LILTLFIGTL YSGLGHSLSS VAARVAAVFV FVSFASLLGI AGIPSLLKEI KIYRSEASNQ
501: HSGAFVFILG QFLGSIPFLF LISISSSLVF YFMVGLRDDF GLLMYFVLNF FMCLLVNEGL MLSIACVWRD VYWTTLTLIS VHVIMMLAAG HFRIRNALPK
601: PLWTYPFAYI SFHTYSIQGL LENEYIGEVF AVGEVRSISG YEAIGGYYLI AADANSKWRN MLVLLAMAFS YRLIVYVLLR FGLNKNVSR

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.