CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 4
cytosol 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26514	Soybean	plasma membrane, plastid	97.79	97.79
KRG89865	Soybean	plastid	63.67	94.08
VIT_06s0061g00350.t01	Wine grape	plastid	85.91	86.15
Solyc11g069710.1.1	Tomato	plastid	83.43	83.54
PGSC0003DMT400050589	Potato	plastid	82.87	82.99
Solyc06g074970.1.1	Tomato	plastid	67.54	81.23
CDY30512	Canola	cytosol	46.13	80.87
PGSC0003DMT400031312	Potato	plastid	78.59	78.7
AT2G28070.1	Thale cress	plastid	79.28	78.63
Bra011981.1-P	Field mustard	plastid	79.01	78.14
CDX77150	Canola	plastid	78.18	77.53
Bra034385.1-P	Field mustard	plastid	73.2	76.92
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	73.62	73.01
CDX71393	Canola	plastid	78.59	71.3
CDY04533	Canola	mitochondrion	79.14	70.22
EER90467	Sorghum	cytosol, plasma membrane, plastid	66.3	66.48
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	65.88	65.98
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	65.61	65.34
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	65.33	65.33
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	63.67	64.12
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	65.61	44.06
KRH42133	Soybean	extracellular	33.84	35.25
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	34.25	35.13
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	34.25	35.08
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	33.29	34.78
KRH66902	Soybean	cytosol	13.95	34.35
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	31.63	33.78
KRH24076	Soybean	cytosol, peroxisome, plasma membrane	32.18	33.53
KRH29048	Soybean	cytosol, peroxisome, plasma membrane	32.32	33.48
KRH42130	Soybean	plasma membrane	29.56	33.39
KRH18182	Soybean	cytosol	31.08	33.28
KRH66901	Soybean	plasma membrane	19.75	32.95
KRH42131	Soybean	cytosol, nucleus, plasma membrane	31.63	32.76
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	30.94	32.51
KRH42128	Soybean	plasma membrane	27.62	32.1
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	28.87	31.71
KRH29043	Soybean	cytosol, peroxisome, plasma membrane	29.97	31.36
KRH24072	Soybean	cytosol, peroxisome, plasma membrane	29.7	31.25
KRH66900	Soybean	plasma membrane	27.62	30.26
KRH42124	Soybean	cytosol	27.9	29.88
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	28.04	29.59
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	17.96	29.55
KRH18188	Soybean	cytosol	24.86	28.35
KRH62969	Soybean	plasma membrane	3.73	25.96
KRH66903	Soybean	extracellular	4.01	22.83
KRG95235	Soybean	plasma membrane	27.9	18.02
KRH25067	Soybean	plasma membrane	21.55	14.3
KRH19928	Soybean	plasma membrane	21.55	14.19
KRH30616	Soybean	plasma membrane	21.41	14.12
KRH32536	Soybean	plasma membrane	21.27	14.01
KRG91932	Soybean	plasma membrane	20.72	13.45
KRH34842	Soybean	plasma membrane	20.58	13.35
KRH71703	Soybean	plasma membrane	19.89	12.94

Protein Annotations

EntrezGene:100799773	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
EMBL:ACUP02008437	EnsemblPlantsGene:GLYMA_13G323500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	UniProt:I1M4I0	InterPro:IPR003439	EnsemblPlants:KRH22852	ProteinID:KRH22852	ProteinID:KRH22852.1
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF447
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000233AB04	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:-:41799767..41806286

Molecular Weight (calculated)

80473.0 Da

IEP (calculated)

8.685

GRAVY (calculated)

0.227

Length

724 amino acids

Sequence
(BLAST)

001: MEEIQSQSDN YRSSSSSASS PASRVPSSNF FYLRKPGSLR QPISFEDSPE WEDTDIDVRV EEGGDSINVA TTPASPSLSK LNSGSLPSPR LPEGAVIPRK
101: IAGASVAWKD LTITIKGKRK YSDKVIKSST GYALPGTMTV IMGPAKSGKS TLLRAIAGRL HPSARMYGEV FVNGAKSQMP YGSYGYVERE TTLIGSLTVR
201: EFLYYSALLQ LPGFFCQKKS VVEDAIHAMS LGDHANKLIG GHCYMKGLPS GERRLVSIAR ELVMRPHILF IDEPLYHLDS VSALLMMVTL KRLASTGYTL
301: IVTIYQSSTE VFGLFDRICL LSNGNTLFFG ETLACLQHFS NAGFPCPIMQ SPSDHFLRAI NTDFDRIIAM CKNWQDDNGD FSSVNMDTAV AIRTLEATYK
401: SSADAAAVET MILKLTEKEG PVLKSKGKAS NATRIAVLTW RSLLVVSREW NYYWLHLTLY MLLTLCIGTV FSGLGHSLSS VVTRVAAIFV FVSFCSLLSI
501: ARVPALLKEI KIYACEESNQ HSSTLVFLLA QLLSSIPFLF LISISSSLVF YFLVGLEDQF SLLMYFVLNF FMTLLVNEGL MLVVATLWQD VFWSVLTLLC
601: IHVAMMLPAG YFRVRNALPG PMWVYPMSYI AFHTYSIQGL LENEYLGTSF AVGQVRTISG FQALQNVYNI SPDTNSKWKN LLVLFLMAIG YRIFVFILLF
701: FSVGRKISLR KCFKCNNRDT TDTS

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.