CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24072	Soybean	cytosol, peroxisome, plasma membrane	95.23	95.78
VIT_06s0061g00260.t01	Wine grape	cytosol	69.8	70.82
KRH24076	Soybean	cytosol, peroxisome, plasma membrane	68.06	67.77
KRH29048	Soybean	cytosol, peroxisome, plasma membrane	67.63	66.95
Bra018911.1-P	Field mustard	plastid	57.95	63.65
CDY22844	Canola	plastid	57.8	63.49
CDY49810	Canola	plasma membrane	57.66	63.33
AT1G51460.1	Thale cress	plasma membrane	61.56	62.83
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	61.42	61.77
GSMUA_Achr4P00390_001	Banana	plasma membrane	54.77	61.23
KRH66902	Soybean	cytosol	25.58	60.2
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	59.39	59.65
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	59.83	59.14
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	58.67	58.93
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	58.67	58.93
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	58.67	58.93
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	58.53	58.87
Zm00001d010426_P001	Maize	plastid	58.24	58.41
KRH66901	Soybean	plasma membrane	32.95	52.53
KRH62969	Soybean	plasma membrane	7.66	50.96
KRH66900	Soybean	plasma membrane	48.12	50.38
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	51.3	50.21
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	51.16	50.14
KRH66903	Soybean	extracellular	8.96	48.82
GSMUA_Achr4P00380_001	Banana	plastid	53.9	44.99
KRH42130	Soybean	plasma membrane	40.75	43.99
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	27.6	43.41
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	42.34	43.22
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	43.21	43.15
KRH42133	Soybean	extracellular	43.21	43.02
KRH18182	Soybean	cytosol	41.91	42.9
KRH42128	Soybean	plasma membrane	38.01	42.22
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	41.47	41.65
KRH42131	Soybean	cytosol, nucleus, plasma membrane	41.91	41.49
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	38.29	40.21
KRH42124	Soybean	cytosol	37.14	38.02
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	36.71	37.03
KRH18188	Soybean	cytosol	32.8	35.75
KRH22852	Soybean	cytosol, plastid	31.36	29.97
KRH26514	Soybean	plasma membrane, plastid	31.07	29.7
KRG89865	Soybean	plastid	20.95	29.59
KRG95235	Soybean	plasma membrane	47.4	29.26
KRH32536	Soybean	plasma membrane	23.7	14.92
KRH19928	Soybean	plasma membrane	23.27	14.65
KRH25067	Soybean	plasma membrane	22.98	14.57
KRH30616	Soybean	plasma membrane	22.98	14.48
KRG91932	Soybean	plasma membrane	22.4	13.9
KRH34842	Soybean	plasma membrane	22.4	13.89
KRH71703	Soybean	plasma membrane	21.97	13.66

Protein Annotations

EntrezGene:100806806	MapMan:21.9.4.2	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A0R0HMS1	InterPro:AAA+_ATPase
InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:ACUP02006778	EnsemblPlantsGene:GLYMA_11G093800	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	InterPro:IPR003439	EnsemblPlants:KRH29043	ProteinID:KRH29043	ProteinID:KRH29043.1	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF186
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000233C69E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr11:-:7116598..7123230

Molecular Weight (calculated)

77338.1 Da

IEP (calculated)

9.324

GRAVY (calculated)

0.055

Length

692 amino acids

Sequence
(BLAST)

001: MEIELATTNE KGVTDYGDTV SENNNNTNNN RRGMYLVWED LTVVVPNFGN GHTRRLLDGL SGYAEPNRIM AIMGPSGSGK STLLDALAGR LSRNVIMSGN
101: VLLNGKKRRL DYGVVAYVTQ EDIMLGTLTV RETISYSANL RLPSTMTKEE VNDIIEGTIM EMGLQDCADR LVGNWHLRGI SGGEKKRLSI ALEILTRPSL
201: LFLDEPTSGL DSASAYFVAQ TLRNLGHDGK STVISSIHQP SSEVFALFDD LFLLSGGQTI YFGPAQKAVE FFAKAGFPCP SRRNPSDHFL RCINSDFDAV
301: TTTMMACQRV HEEMSITGSL STAAIKATLI EKYRWSEHAT TARARIKEIS TTEGHGFESK SKCEAKWWKQ LSTLTRRSVV NMSRDVGYYW IRITIYVALS
401: LSVGTIFYGV GSSYRAIFAR GACGAFISGF MTFMSIGGFP SFIEEMKVFY KERLNGYYGV GVYILSNFLS SFPFVAVMSI ATGTITYYMV KFRTEFSHYV
501: YICLDLIGCI AVVESSMMII ASLVPNFLMG LIIGAGYIGV MMMTAGYFRQ IPDLPKIFWR YPISYINYGA WGLQGAFKND MIGMEFDSLE PGGPKLKGEI
601: ILKTMLGIRV DISKWWDLVA VMIILVLLRV LFFFILKFKE RAAPFLYSIY ARQTLQRIKK RPSFRKGPSF PSKRHQSLHP LSSQEGLNSP IH

Best Arabidopsis Sequence Match ( AT1G51460.1 )
(BLAST)

001: MTTPEGAMYV AWEDLTVVIP NFGEGATKRL LNGVNGCGEP NRILAIMGPS GSGKSTLLDA LAGRLAGNVV MSGKVLVNGK KRRLDFGAAA YVTQEDVLLG
101: TLTVRESISY SAHLRLPSKL TREEISDIVE ATITDMGLEE CSDRTIGNWH LRGISGGEKK RLSIALEVLT KPSLLFLDEP TSGLDSASAF FVVQILRNIA
201: SSGKTVVSSI HQPSGEVFAL FDDLLLLSGG ETVYFGEAES ATKFFGEAGF PCPSRRNPSD HFLRCVNSDF DNVTAALVES RRINDSSFSL HQLHETTNTL
301: DPLDDIPTAE IRTTLVRKFK CSLYAAASRA RIQEIASIVG IVTERKKGSQ TNWWKQLRIL TQRSFINMSR DLGYYWMRIA VYIVLSICVG SIFFNVGRNH
401: TNVMSTAACG GFMAGFMTFM SIGGFQSFIE EMKVFSRERL NGHYGVAVYT VSNLLSSLPF IILMCLSTSS ITIYMVRFQS GGSHFFYNCL DLICAITTVE
501: SCMMMIASVV PNFLMGVMLG AGYIGIMVLS AGFFRFFPDL PMVFWRYPVS YINYGAWALQ GAYKNEMIGV EYDSPLPLVP KMKGELILQT VLGINPESSK
601: WLDLAVVMMI LIGYRIAFFA ILKFREKVFP VIHMLYTKRT LSHIQKRPSF RRMTPFPSRR YPVHHALSSQ EGLNSPLH

Arabidopsis Description

ABCG13ABC transporter G family member 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8J8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.