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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, peroxisome, plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G268700.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G303100.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G268800.1
TraesCS3D01G328300.1
TraesCS4A01G206200.2
TraesCS4B01G109800.2
TraesCS4B01G131100.1
TraesCS4D01G107200.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G107900.1
TraesCS5A01G139700.1
TraesCS5B01G059900.1
TraesCS5B01G115400.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G122800.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G51500.1 TraesCS1A01G308700.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS1A01G308800.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS1B01G319300.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS1D01G308000.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS2B01G113800.2 AT3G56800.1 15299147
AT1G51500.1 TraesCS3A01G184500.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS3A01G191900.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS3A01G335000.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS3B01G219900.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS3B01G365900.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS3D01G188600.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS3D01G194500.2 AT3G56800.1 15299147
AT1G51500.1 TraesCS3D01G328300.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS4B01G131100.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS4D01G126100.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS5A01G057100.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS5A01G057200.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS5A01G139700.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS5B01G059900.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS5B01G137100.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS5D01G068000.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS5D01G068100.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS5D01G153400.1 AT3G56800.1 15299147
AT1G51500.1 TraesCS3A01G268700.1 AT4G03560.1 15299147
AT1G51500.1 TraesCS3B01G303100.1 AT4G03560.1 15299147
AT1G51500.1 TraesCS3D01G268800.1 AT4G03560.1 15299147
AT3G21090.1 TraesCS4A01G206200.2 AT4G09570.1 19130088
AT3G21090.1 TraesCS4B01G109800.2 AT4G09570.1 19130088
AT3G21090.1 TraesCS4D01G107200.1 AT4G09570.1 19130088
AT3G21090.1 TraesCS5A01G107900.1 AT4G09570.1 19130088
AT3G21090.1 TraesCS5B01G115400.1 AT4G09570.1 19130088
AT3G21090.1 TraesCS5D01G122800.1 AT4G09570.1 19130088
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G147700.1 Wheat nucleus, peroxisome, plasma membrane 99.85 99.85
TraesCS1A01G126900.1 Wheat nucleus, peroxisome, plasma membrane 99.85 99.85
HORVU1Hr1G030200.1 Barley nucleus, peroxisome, plasma membrane 98.11 98.11
EES19248 Sorghum cytosol, peroxisome, plasma membrane 87.95 88.08
Zm00001d010426_P001 Maize plastid 87.81 87.68
Os05t0222200-01 Rice nucleus, peroxisome, plasma membrane 88.97 87.57
VIT_06s0061g00230.t01 Wine grape plasma membrane 58.64 64.95
GSMUA_Achr4P00390_001 Banana plasma membrane 57.76 64.3
CDX87823 Canola nucleus, peroxisome, plasma membrane 61.25 62.33
Bra030437.1-P Field mustard nucleus, peroxisome, plasma membrane 62.55 62.28
CDY43913 Canola nucleus, peroxisome, plasma membrane 62.55 62.28
AT3G21090.1 Thale cress cytosol, peroxisome, plasma membrane 62.26 62.08
KRH24076 Soybean cytosol, peroxisome, plasma membrane 62.41 61.87
Solyc11g065350.1.1 Tomato cytosol, peroxisome, plasma membrane 61.1 61.73
PGSC0003DMT400077106 Potato cytosol, peroxisome, plasma membrane 61.1 61.73
AT1G51500.1 Thale cress cytosol, peroxisome, plasma membrane 61.54 61.72
CDY06406 Canola peroxisome 60.81 61.71
CDY61513 Canola golgi, mitochondrion, peroxisome, plasma membrane 56.31 61.59
Bra031249.1-P Field mustard peroxisome 61.54 61.36
KRH29048 Soybean cytosol, peroxisome, plasma membrane 62.12 61.23
VIT_06s0061g00260.t01 Wine grape cytosol 60.52 61.14
KRH24072 Soybean cytosol, peroxisome, plasma membrane 59.07 59.16
KRH29043 Soybean cytosol, peroxisome, plasma membrane 58.93 58.67
CDY49810 Canola plasma membrane 52.25 57.14
Bra018911.1-P Field mustard plastid 52.1 56.98
CDY22844 Canola plastid 51.96 56.83
AT1G51460.1 Thale cress plasma membrane 55.73 56.64
Solyc11g065360.1.1 Tomato cytosol, peroxisome, plasma membrane 56.17 56.25
CDY18337 Canola plasma membrane 19.88 55.47
KRH66902 Soybean cytosol 23.37 54.76
VIT_06s0061g00240.t01 Wine grape cytosol, peroxisome, plasma membrane 54.28 51.44
KRH66901 Soybean plasma membrane 32.08 50.92
TraesCS1D01G161500.2 Wheat cytosol, peroxisome, plasma membrane 50.65 48.74
KRH66900 Soybean plasma membrane 45.72 47.66
GSMUA_Achr4P00380_001 Banana plastid 55.01 45.72
TraesCS2D01G370400.2 Wheat plastid 51.09 45.36
KRH66903 Soybean extracellular 7.98 43.31
TraesCS1D01G150800.1 Wheat cytosol, peroxisome, plasma membrane 43.25 41.39
TraesCS5D01G257000.1 Wheat nucleus, peroxisome, plasma membrane, plastid 43.25 40.65
TraesCS5D01G257100.2 Wheat nucleus, peroxisome, plasma membrane, plastid 43.4 40.57
TraesCS5D01G257400.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 42.38 39.84
TraesCS2D01G110700.1 Wheat plastid 38.17 39.2
TraesCS2D01G110800.1 Wheat plastid 38.32 38.94
TraesCS6D01G128600.1 Wheat plastid 39.04 37.89
KRG95235 Soybean plasma membrane 46.01 28.28
TraesCS5D01G551400.1 Wheat cytosol, peroxisome, plasma membrane 29.61 28.18
TraesCS1D01G140400.1 Wheat plasma membrane 22.21 14.93
TraesCS2D01G048800.1 Wheat plasma membrane 21.63 13.77
TraesCS6D01G380300.1 Wheat plasma membrane 22.93 13.18
Protein Annotations
MapMan:21.9.4.2MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0016020GO:GO:0016787GO:GO:0016887InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF338
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixEnsemblPlantsGene:TraesCS1D01G126600EnsemblPlants:TraesCS1D01G126600.1TIGR:cd03213
Description
No Description!
Coordinates
chr1D:+:138204199..138209004
Molecular Weight (calculated)
76444.5 Da
IEP (calculated)
9.447
GRAVY (calculated)
0.125
Length
689 amino acids
Sequence
(BLAST)
001: MGEGNGTAWA GALSPAARYA ETGGASLTWE NLTAVLPGSG GRPTKKLLQG LYGYAVPGRI VAIMGPSGSG KSTLLDSLSG RLARNVLQTG KVLLNGKKRR
101: LDFGAVAYVT QENVLLGTLT VRETVTYSAQ LRLPSSMSKA EVRRVVDDTL DEMGLRECAE RPIGTWHLRG ISGGEKKRLC IALEILTRPR LLFLDEPTSG
201: LDSASAFSVI ETLRTLAIDG GRTIVSSVHQ PSSEVFALFD DLCLLSSGES VYFGDAKLAP QFFAETGFPC PSRRNPSDHF LRCVNSDFDD VATALKGSMK
301: LRAEADLDPL LKYSTTEIRE RLVDKYRISD YAMMVRNTIH EISKIEGVME EAVKGSQATW CKQLRTLTKR SYINMYRDFG YYRLRIIIYV LMAICLGTIY
401: YDVGNGYTAI QARASCGGFV SGFMTFMSIG GFPSFIEEMK VFSLERQNGH YGVAAYIISN FLSSMPFLLT MSWASASITY WMVKFRPGFS YFAFFALNLY
501: GGVSVIESLM MIISALVPNF LMGLILGAGV IGIMMLTSGF FRLLPELPKI FWKYPVSYIV YGSWGLKGAY KNDLLGLEFE PMTPGGEKLT GEFIITNMMG
601: LSVSYSKWLD LAMIFILLLA YRITFFFVLK VKEAAAPYLR VAYTRFTVKR LERRASFRES LAMTSLSKRH NAPHPMAMQE GLNSPMQQY
Best Arabidopsis Sequence Match ( AT3G21090.1 )
(BLAST)
001: MELEGSSSGR RQLPSKLEMS RGAYLAWEDL TVVIPNFSDG PTRRLLQRLN GYAEPGRIMA IMGPSGSGKS TLLDSLAGRL ARNVVMTGNL LLNGKKARLD
101: YGLVAYVTQE DVLLGTLTVR ETITYSAHLR LPSDMSKEEV SDIVEGTIME LGLQDCSDRV IGNWHARGVS GGERKRVSIA LEILTRPQIL FLDEPTSGLD
201: SASAFFVIQA LRNIARDGRT VISSVHQPSS EVFALFDDLF LLSSGESVYF GEAKSAVEFF AESGFPCPKK RNPSDHFLRC INSDFDTVTA TLKGSQRIQE
301: TPATSDPLMN LATSVIKARL VENYKRSKYA KSAKSRIREL SNIEGLEMEI RKGSEATWWK QLRTLTARSF INMCRDVGYY WTRIISYIVV SISVGTIFYD
401: VGYSYTSILA RVSCGGFITG FMTFMSIGGF PSFLEEMKVF YKERLSGYYG VSVYILSNYI SSFPFLVAIS VITGTITYNL VKFRPGFSHY AFFCLNIFFS
501: VSVIESLMMV VASVVPNFLM GLITGAGLIG IIMMTSGFFR LLPDLPKIFW RYPVSYISYG SWAIQGGYKN DFLGLEFEPL FPGEPKMTGE EVIEKVFGVK
601: VTYSKWWDLA AVVAILVCYR LLFFVVLKLR ERAGPALKAI QAKRTMRNLD RRPSFKRMPS LSLSLSSMSS RRHQPLRSLS SQEGLNSPIH Y
Arabidopsis Description
ABCG15ABC transporter G family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWI9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.