CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, golgi, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
peroxisome 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX90725
CDY05064

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21090.1	CDX90725	AT4G09570.1	19130088
AT3G21090.1	CDY05064	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18337	Canola	plasma membrane	39.21	100.0
Bra031249.1-P	Field mustard	peroxisome	98.1	89.44
CDY06406	Canola	peroxisome	95.24	88.37
AT3G21090.1	Thale cress	cytosol, peroxisome, plasma membrane	93.02	84.8
CDY43913	Canola	nucleus, peroxisome, plasma membrane	84.44	76.88
CDX87823	Canola	nucleus, peroxisome, plasma membrane	82.06	76.37
VIT_06s0061g00230.t01	Wine grape	plasma membrane	68.25	69.13
KRH24076	Soybean	cytosol, peroxisome, plasma membrane	72.22	65.47
KRH29048	Soybean	cytosol, peroxisome, plasma membrane	71.75	64.66
Solyc11g065350.1.1	Tomato	cytosol, peroxisome, plasma membrane	67.3	62.17
PGSC0003DMT400077106	Potato	cytosol, peroxisome, plasma membrane	67.3	62.17
GSMUA_Achr4P00390_001	Banana	plasma membrane	58.1	59.13
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	63.33	57.99
Zm00001d010426_P001	Maize	plastid	63.17	57.68
CDY22844	Canola	plastid	57.46	57.46
CDY49810	Canola	plasma membrane	57.46	57.46
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	61.75	56.46
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	61.59	56.31
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	61.59	56.31
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	62.54	56.29
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	61.43	56.17
CDY19179	Canola	cytosol, peroxisome, plasma membrane	49.52	46.15
CDY26211	Canola	cytosol, peroxisome, plasma membrane	49.37	46.01
CDX96749	Canola	cytosol, peroxisome, plasma membrane	49.05	45.64
CDX83888	Canola	cytosol, peroxisome, plasma membrane	49.05	45.51
GSMUA_Achr4P00380_001	Banana	plastid	56.19	42.7
CDX77150	Canola	plastid	30.16	26.03
CDY30512	Canola	cytosol	16.67	25.42
CDX71393	Canola	plastid	31.27	24.69
CDY04533	Canola	mitochondrion	30.95	23.9
CDX71030	Canola	plasma membrane	20.79	13.72
CDY25855	Canola	plasma membrane	22.22	13.5
CDY62072	Canola	endoplasmic reticulum, golgi, plasma membrane	22.54	13.33
CDY51880	Canola	plasma membrane	21.9	13.09
CDY24098	Canola	plasma membrane	22.06	13.05
CDY62076	Canola	plasma membrane	21.59	12.52
CDY24100	Canola	plasma membrane	21.59	12.52
CDY11955	Canola	plasma membrane	21.59	12.5
CDY36779	Canola	plasma membrane	20.95	12.35
CDX91328	Canola	plasma membrane	20.48	11.93
CDX74994	Canola	plasma membrane	20.48	11.93
CDY70653	Canola	extracellular, golgi, vacuole	0.0	0.0

Protein Annotations

MapMan:21.9.4.2	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078J595	UniProt:A0A078J595	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDY61513	ProteinID:CDY61513	ProteinID:CDY61513.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00033976001	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF338
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004EF2DC4	SEG:seg	:	:

Description

BnaAnng17530DBnaAnng17530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J595]

Coordinates

chrLK034007:+:406..3388

Molecular Weight (calculated)

70829.1 Da

IEP (calculated)

9.774

GRAVY (calculated)

0.088

Length

630 amino acids

Sequence
(BLAST)

001: MKFSSTVKKI ILELSTGRLA RNVIMTGNLL LNGKKARLDY GLVAYVTQED ILLGTLTVRE TITYSARLRL PSDMSNEEVS DIVEGTIMEL GLQDCADRAI
101: GNWHARGVSG GERKRVSIAL EILTRPQILF LDEPTSGLDS ASAFFVIQTL RNIARDGRTV ISSIHQPSSE VFALFDDLFL LSSGESVYFG EAKSAVEFFA
201: ESGFPCPKKR NPSDHFLRCI NSDFDTVTAT LKGSQRIQET PATSDPLMNL ATPVIRARLV ENYRRSKYAK SAKSRIQELS NIDGSEMEVR RGSEASWWRQ
301: LRTLTARSFI NMCRDVGYYW TRIVSYIVVS ISVGTIFYDV GYSYTSILAR VSCGGFITGF MTFMSIGGFP SFLEEMKVFY KERMSGYYGV SVYILSNYIS
401: SFPFLVSLSV ITGTITYNLV KFRPGFSHYA FFCLNIFFSV SVIESLMMVV ASLVPNFLMG LVTGAGLIGI IMMTSGFFRL LPDLPKIFWR YPVSYISYGS
501: WAIQGGYKND FLGLEFEPLF PGEPKMTGEE VINKIFRVKV THSKWWDLAA VVGILVCYRL LFFVVLKLKE RAGPALKAIQ AKRTMRNLDR RPSFKRMPSL
601: SLSLSSMSSR RHQPFRSLSS QEGLNSPAHY

Best Arabidopsis Sequence Match ( AT3G21090.1 )
(BLAST)

001: MELEGSSSGR RQLPSKLEMS RGAYLAWEDL TVVIPNFSDG PTRRLLQRLN GYAEPGRIMA IMGPSGSGKS TLLDSLAGRL ARNVVMTGNL LLNGKKARLD
101: YGLVAYVTQE DVLLGTLTVR ETITYSAHLR LPSDMSKEEV SDIVEGTIME LGLQDCSDRV IGNWHARGVS GGERKRVSIA LEILTRPQIL FLDEPTSGLD
201: SASAFFVIQA LRNIARDGRT VISSVHQPSS EVFALFDDLF LLSSGESVYF GEAKSAVEFF AESGFPCPKK RNPSDHFLRC INSDFDTVTA TLKGSQRIQE
301: TPATSDPLMN LATSVIKARL VENYKRSKYA KSAKSRIREL SNIEGLEMEI RKGSEATWWK QLRTLTARSF INMCRDVGYY WTRIISYIVV SISVGTIFYD
401: VGYSYTSILA RVSCGGFITG FMTFMSIGGF PSFLEEMKVF YKERLSGYYG VSVYILSNYI SSFPFLVAIS VITGTITYNL VKFRPGFSHY AFFCLNIFFS
501: VSVIESLMMV VASVVPNFLM GLITGAGLIG IIMMTSGFFR LLPDLPKIFW RYPVSYISYG SWAIQGGYKN DFLGLEFEPL FPGEPKMTGE EVIEKVFGVK
601: VTYSKWWDLA AVVAILVCYR LLFFVVLKLR ERAGPALKAI QAKRTMRNLD RRPSFKRMPS LSLSLSSMSS RRHQPLRSLS SQEGLNSPIH Y

Arabidopsis Description

ABCG15ABC transporter G family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWI9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.