Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 5
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71030 | Canola | plasma membrane | 84.94 | 95.08 |
| Bra028945.1-P | Field mustard | plasma membrane | 99.91 | 93.11 |
| CDY11955 | Canola | plasma membrane | 92.42 | 90.81 |
| AT5G60740.1 | Thale cress | plasma membrane | 87.84 | 84.67 |
| KRH25067 | Soybean | plasma membrane | 67.26 | 65.9 |
| KRH30616 | Soybean | plasma membrane | 67.26 | 65.48 |
| VIT_06s0004g02490.t01 | Wine grape | plasma membrane | 66.14 | 64.33 |
| Solyc11g069820.1.1 | Tomato | plasma membrane | 63.14 | 61.76 |
| PGSC0003DMT400031316 | Potato | mitochondrion, plastid | 60.43 | 60.26 |
| CDX91328 | Canola | plasma membrane | 59.68 | 59.02 |
| CDX74994 | Canola | plasma membrane | 59.68 | 59.02 |
| Solyc06g075020.2.1 | Tomato | plasma membrane | 59.87 | 58.5 |
| CDY25855 | Canola | plasma membrane | 54.82 | 56.51 |
| CDY51880 | Canola | plasma membrane | 54.82 | 55.6 |
| CDY62076 | Canola | plasma membrane | 56.13 | 55.25 |
| CDY62072 | Canola | endoplasmic reticulum, golgi, plasma membrane | 55.0 | 55.21 |
| CDY24100 | Canola | plasma membrane | 55.94 | 55.06 |
| CDY24098 | Canola | plasma membrane | 54.26 | 54.46 |
| CDY70653 | Canola | extracellular, golgi, vacuole | 16.37 | 49.44 |
| CDY30512 | Canola | cytosol | 9.92 | 25.67 |
| CDY26211 | Canola | cytosol, peroxisome, plasma membrane | 14.5 | 22.93 |
| CDY19179 | Canola | cytosol, peroxisome, plasma membrane | 14.41 | 22.78 |
| CDX87823 | Canola | nucleus, peroxisome, plasma membrane | 14.31 | 22.6 |
| CDX96749 | Canola | cytosol, peroxisome, plasma membrane | 14.31 | 22.6 |
| CDX83888 | Canola | cytosol, peroxisome, plasma membrane | 14.31 | 22.53 |
| CDY43913 | Canola | nucleus, peroxisome, plasma membrane | 14.5 | 22.4 |
| CDY49810 | Canola | plasma membrane | 13.19 | 22.38 |
| CDY22844 | Canola | plastid | 12.91 | 21.9 |
| CDY06406 | Canola | peroxisome | 13.75 | 21.65 |
| CDY61513 | Canola | golgi, mitochondrion, peroxisome, plasma membrane | 12.35 | 20.95 |
| CDX77150 | Canola | plastid | 13.38 | 19.59 |
| CDX71393 | Canola | plastid | 13.94 | 18.67 |
| CDY04533 | Canola | mitochondrion | 13.94 | 18.26 |
| CDY18337 | Canola | plasma membrane | 1.87 | 8.1 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | GO:A0A078HH94 | UniProt:A0A078HH94 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EnsemblPlants:CDY36779 | ProteinID:CDY36779 | ProteinID:CDY36779.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00062611001 | InterPro:IPR003439 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF01061 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF435 |
| SMART:SM00382 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EECF15 | SEG:seg |
Description
BnaA03g11070DBnaA03g11070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HH94]
Coordinates
chrLK032383:+:230639..235551
Molecular Weight (calculated)
119368.0 Da
IEP (calculated)
8.778
GRAVY (calculated)
-0.126
Length
1069 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGRRKLCFQE TFVSFFVSLV FIFHRGVICQ DDSSLDNPAA NRLYNQFVFD KISNLTEVFE DDIKRELGFC ITNVKEDYNE AFNFSSKPGF LNKCGKTTKG
0101: DMMQRICTAA EVRIYFNGLL GGAKRATNYL KPNKNCNLSS WMSGCEPGWA CRTAKDVKVD LKDDKNVPVR TQQCAPCCAG FFCPRGITCM IPCPLGAYCP
0201: EAKLNRTTGL CDPYHYQLPS GQPNHTCGGA DIWADIVSSS EVFCSAGSFC PSTIDKLPCT RGHFCRTGST AEKNCFKLAT CNPRSTNQNI TAYGIMLFAG
0301: LGFLLIILYN CSDQVLATRE RRQAKSREKA VQSVRETQTQ EKWKSAKDIA KKHATELQQS FSRTFSRRKS MKQPDLMRGK SLHTQSQMFR YAYGQIEKEK
0401: AMQEQNKNLT FSGVISMAND IEIRKRPTIE VAFKDLTITL KGKNKHLMRC VTGKLSPGRV SAVMGPSGAG KTTFLTALTG KAAGCTMTGM ILVNGKVESI
0501: QSYKRIIGFV PQDDIVHGNL TVEENLWFSA RCRLPADLPK PEKVLVVERV IESLGLQHVR DSMVGTVEKR GISGGQRKRV NVGLEMVMEP SLLILDEPTS
0601: GLDSSSSQLL LRALRREALE GVNICMVVHQ PSYTLFRMFD DLILLAKGGL ICYQGSVKKV EEYFSSLGIV VPERVNPPDY YIDILEGILK PSTSSGVTYK
0701: QLPVRWMLHN GYPVPSDMLK SIEGMASAEN SAHGGSAHGS VFWQDVKANV EIKKDTLQNN FSNSGDLSQR QVPGVYQQFR YFLGRLGKQR LREARTLAVD
0801: YLILLLAGIC LGTLAKVSDE TFGAMGYTYT VIAVSLLCKI TALRSFSLDK LHYWRESRAG MSSLAYFLAK DTVDHFNTIV KPLVYLSMFY FFNNPRSSVG
0901: DNYIVLICLV YCVTGIAFAL AILFEPGPAQ LWSVLLPVVL TLIATSTNDN KIVESISELC YTRWALEAFV VSNAQRSLAY HSLWITDGEW LQHQALPSLP
1001: HLPDINRHLE PLCSVLLYGN FPKEVALSSF YACKTILDGS IVNIEKPQRF YKKKQYTIIA EDHNTVHCS
0101: DMMQRICTAA EVRIYFNGLL GGAKRATNYL KPNKNCNLSS WMSGCEPGWA CRTAKDVKVD LKDDKNVPVR TQQCAPCCAG FFCPRGITCM IPCPLGAYCP
0201: EAKLNRTTGL CDPYHYQLPS GQPNHTCGGA DIWADIVSSS EVFCSAGSFC PSTIDKLPCT RGHFCRTGST AEKNCFKLAT CNPRSTNQNI TAYGIMLFAG
0301: LGFLLIILYN CSDQVLATRE RRQAKSREKA VQSVRETQTQ EKWKSAKDIA KKHATELQQS FSRTFSRRKS MKQPDLMRGK SLHTQSQMFR YAYGQIEKEK
0401: AMQEQNKNLT FSGVISMAND IEIRKRPTIE VAFKDLTITL KGKNKHLMRC VTGKLSPGRV SAVMGPSGAG KTTFLTALTG KAAGCTMTGM ILVNGKVESI
0501: QSYKRIIGFV PQDDIVHGNL TVEENLWFSA RCRLPADLPK PEKVLVVERV IESLGLQHVR DSMVGTVEKR GISGGQRKRV NVGLEMVMEP SLLILDEPTS
0601: GLDSSSSQLL LRALRREALE GVNICMVVHQ PSYTLFRMFD DLILLAKGGL ICYQGSVKKV EEYFSSLGIV VPERVNPPDY YIDILEGILK PSTSSGVTYK
0701: QLPVRWMLHN GYPVPSDMLK SIEGMASAEN SAHGGSAHGS VFWQDVKANV EIKKDTLQNN FSNSGDLSQR QVPGVYQQFR YFLGRLGKQR LREARTLAVD
0801: YLILLLAGIC LGTLAKVSDE TFGAMGYTYT VIAVSLLCKI TALRSFSLDK LHYWRESRAG MSSLAYFLAK DTVDHFNTIV KPLVYLSMFY FFNNPRSSVG
0901: DNYIVLICLV YCVTGIAFAL AILFEPGPAQ LWSVLLPVVL TLIATSTNDN KIVESISELC YTRWALEAFV VSNAQRSLAY HSLWITDGEW LQHQALPSLP
1001: HLPDINRHLE PLCSVLLYGN FPKEVALSSF YACKTILDGS IVNIEKPQRF YKKKQYTIIA EDHNTVHCS
0001: MGRRNSYFPG NFVPLFFVFI VLILQQERVI CQEDRSLDNP AANRLYNQFV FDKISNLTEV FEDDIKRELG FCITNVKEDY NEAFNFSTKP DFLNACGKTT
0101: KGDMMQRICT AAEVRIYFNG LLGGAKRATN YLKPNKNCNL SSWMSGCEPG WACRTAKDVK VDLKDDKNVP VRTQQCAPCC AGFFCPRGIT CMIPCPLGAY
0201: CPEANLNRTT GLCDPYHYQL PSGQPNHTCG GADIWADIGS SSEVFCSAGS FCPSTIDKLP CTKGHYCRTG STAELNCFKL ATCNPRSTNQ NITAYGIMLF
0301: AGLGFLLIIL YNCSDQVLAT RERRQAKSRE KAVQSVRDSQ SREKWKSAKD IAKKHATELQ QSFSRTFSRR KSMKQPDLMR GLSQAKPGSD AALPPMLGSS
0401: SDTKKGKKKE KNKLTEMLHD IEQNPEDPEG FNLEIGDKNI KKHAPKGKAL HTQSQMFRYA YGQIEKEKAM QEQNKNLTFS GVISMANDID IRKRPMIEVA
0501: FKDLSITLKG KNKHLMRCVT GKLSPGRVSA VMGPSGAGKT TFLTALTGKA PGCIMTGMIL VNGKVESIQS YKKIIGFVPQ DDIVHGNLTV EENLWFSARC
0601: RLPADLPKPE KVLVVERVIE SLGLQHVRDS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LILDEPTSGL DSSSSQLLLR ALRREALEGV NICMVVHQPS
0701: YTLFRMFDDL ILLAKGGLIC YQGPVKKVEE YFSSLGIVVP ERVNPPDYYI DILEGILKPS TSSGVTYKQL PVRWMLHNGY PVPMDMLKSI EGMASSASGE
0801: NSAHGGSAHG SVVGDDGTSF AGEFWQDVKA NVEIKKDNLQ NNFSSSGDLS EREVPGVYQQ YRYFLGRLGK QRLREARTLA VDYLILLLAG ICLGTLAKVS
0901: DETFGAMGYT YTVIAVSLLC KITALRSFSL DKLHYWRESR AGMSSLAYFL AKDTVDHFNT IVKPLVYLSM FYFFNNPRST VTDNYVVLIC LVYCVTGIAY
1001: TLAILFEPGP AQLWSVLLPV VLTLIATSTN DNKIVDSISE LCYTRWALEA FVVSNAQRYK GVWLITRCGS LMENGYNIKH FPRCLVFLTL TGILSRCAAF
1101: FCMVTFQKK
0101: KGDMMQRICT AAEVRIYFNG LLGGAKRATN YLKPNKNCNL SSWMSGCEPG WACRTAKDVK VDLKDDKNVP VRTQQCAPCC AGFFCPRGIT CMIPCPLGAY
0201: CPEANLNRTT GLCDPYHYQL PSGQPNHTCG GADIWADIGS SSEVFCSAGS FCPSTIDKLP CTKGHYCRTG STAELNCFKL ATCNPRSTNQ NITAYGIMLF
0301: AGLGFLLIIL YNCSDQVLAT RERRQAKSRE KAVQSVRDSQ SREKWKSAKD IAKKHATELQ QSFSRTFSRR KSMKQPDLMR GLSQAKPGSD AALPPMLGSS
0401: SDTKKGKKKE KNKLTEMLHD IEQNPEDPEG FNLEIGDKNI KKHAPKGKAL HTQSQMFRYA YGQIEKEKAM QEQNKNLTFS GVISMANDID IRKRPMIEVA
0501: FKDLSITLKG KNKHLMRCVT GKLSPGRVSA VMGPSGAGKT TFLTALTGKA PGCIMTGMIL VNGKVESIQS YKKIIGFVPQ DDIVHGNLTV EENLWFSARC
0601: RLPADLPKPE KVLVVERVIE SLGLQHVRDS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LILDEPTSGL DSSSSQLLLR ALRREALEGV NICMVVHQPS
0701: YTLFRMFDDL ILLAKGGLIC YQGPVKKVEE YFSSLGIVVP ERVNPPDYYI DILEGILKPS TSSGVTYKQL PVRWMLHNGY PVPMDMLKSI EGMASSASGE
0801: NSAHGGSAHG SVVGDDGTSF AGEFWQDVKA NVEIKKDNLQ NNFSSSGDLS EREVPGVYQQ YRYFLGRLGK QRLREARTLA VDYLILLLAG ICLGTLAKVS
0901: DETFGAMGYT YTVIAVSLLC KITALRSFSL DKLHYWRESR AGMSSLAYFL AKDTVDHFNT IVKPLVYLSM FYFFNNPRST VTDNYVVLIC LVYCVTGIAY
1001: TLAILFEPGP AQLWSVLLPV VLTLIATSTN DNKIVDSISE LCYTRWALEA FVVSNAQRYK GVWLITRCGS LMENGYNIKH FPRCLVFLTL TGILSRCAAF
1101: FCMVTFQKK
Arabidopsis Description
ABCG28ABC transporter G family member 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF46]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.