Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24098 | Canola | plasma membrane | 95.96 | 95.96 |
| CDY62076 | Canola | plasma membrane | 86.57 | 84.9 |
| CDY24100 | Canola | plasma membrane | 86.48 | 84.81 |
| CDY25855 | Canola | plasma membrane | 79.25 | 81.39 |
| CDY51880 | Canola | plasma membrane | 79.91 | 80.74 |
| AT1G53390.1 | Thale cress | plasma membrane | 80.09 | 76.92 |
| KRG91932 | Soybean | plasma membrane | 63.85 | 60.99 |
| KRH34842 | Soybean | plasma membrane | 63.38 | 60.48 |
| OQU76478 | Sorghum | plasma membrane | 21.5 | 60.26 |
| CDX71030 | Canola | plasma membrane | 53.99 | 60.21 |
| VIT_13s0019g04600.t01 | Wine grape | plasma membrane | 63.29 | 60.18 |
| KRH71703 | Soybean | plasma membrane | 61.88 | 59.21 |
| Solyc04g025170.2.1 | Tomato | mitochondrion | 55.68 | 58.14 |
| GSMUA_Achr4P12050_001 | Banana | mitochondrion, plasma membrane | 57.37 | 58.02 |
| GSMUA_Achr4P05530_001 | Banana | plasma membrane | 54.46 | 57.71 |
| HORVU6Hr1G091510.2 | Barley | mitochondrion | 56.15 | 57.28 |
| CDY11955 | Canola | plasma membrane | 57.65 | 56.43 |
| GSMUA_Achr8P14250_001 | Banana | plasma membrane | 53.24 | 56.19 |
| CDX74994 | Canola | plasma membrane | 56.34 | 55.5 |
| CDX91328 | Canola | plasma membrane | 56.34 | 55.5 |
| Os06t0731200-01 | Rice | plasma membrane | 51.74 | 55.38 |
| TraesCSU01G106900.1 | Wheat | plasma membrane | 55.02 | 55.23 |
| CDY36779 | Canola | plasma membrane | 55.21 | 55.0 |
| GSMUA_Achr11P... | Banana | plasma membrane | 51.74 | 54.83 |
| TraesCS7B01G488900.1 | Wheat | plasma membrane | 54.37 | 54.57 |
| Zm00001d046068_P001 | Maize | plasma membrane | 53.15 | 54.42 |
| Os11t0416900-01 | Rice | plasma membrane | 55.77 | 53.95 |
| HORVU7Hr1G122580.37 | Barley | endoplasmic reticulum, vacuole | 44.41 | 53.93 |
| KXG31382 | Sorghum | plasma membrane | 55.4 | 53.44 |
| Zm00001d018500_P002 | Maize | plasma membrane | 55.31 | 52.97 |
| TraesCS6B01G434900.1 | Wheat | plasma membrane | 56.06 | 52.83 |
| Os04t0194500-01 | Rice | plasma membrane | 51.64 | 51.64 |
| TraesCS6D01G380300.1 | Wheat | plasma membrane | 56.53 | 50.21 |
| Zm00001d004335_P001 | Maize | plasma membrane | 51.27 | 49.91 |
| TraesCS2A01G049700.2 | Wheat | plasma membrane | 50.23 | 49.54 |
| TraesCS2B01G060900.1 | Wheat | plasma membrane | 50.23 | 49.4 |
| TraesCS2D01G048800.1 | Wheat | plasma membrane | 50.14 | 49.35 |
| KXG25878 | Sorghum | plasma membrane | 50.42 | 49.0 |
| Zm00001d025031_P001 | Maize | plasma membrane | 50.42 | 48.77 |
| TraesCS6A01G395000.2 | Wheat | plasma membrane, plastid | 56.62 | 48.43 |
| CDY70653 | Canola | extracellular, golgi, vacuole | 16.06 | 48.31 |
| CDY26211 | Canola | cytosol, peroxisome, plasma membrane | 15.59 | 24.56 |
| CDX87823 | Canola | nucleus, peroxisome, plasma membrane | 15.59 | 24.52 |
| CDY19179 | Canola | cytosol, peroxisome, plasma membrane | 15.4 | 24.26 |
| CDX83888 | Canola | cytosol, peroxisome, plasma membrane | 15.4 | 24.15 |
| CDY06406 | Canola | peroxisome | 15.31 | 24.01 |
| CDX96749 | Canola | cytosol, peroxisome, plasma membrane | 15.21 | 23.93 |
| CDY43913 | Canola | nucleus, peroxisome, plasma membrane | 15.49 | 23.84 |
| CDY30512 | Canola | cytosol | 9.11 | 23.49 |
| CDY49810 | Canola | plasma membrane | 13.62 | 23.02 |
| CDY61513 | Canola | golgi, mitochondrion, peroxisome, plasma membrane | 13.33 | 22.54 |
| CDY22844 | Canola | plastid | 13.24 | 22.38 |
| CDX77150 | Canola | plastid | 13.52 | 19.73 |
| CDX71393 | Canola | plastid | 14.08 | 18.8 |
| CDY04533 | Canola | mitochondrion | 14.08 | 18.38 |
| CDY18337 | Canola | plasma membrane | 2.63 | 11.34 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | GO:A0A078J6G2 | UniProt:A0A078J6G2 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | EnsemblPlants:CDY62072 | ProteinID:CDY62072 | ProteinID:CDY62072.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00035917001 | InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF304 | SMART:SM00382 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | UniParc:UPI0004EDD824 | SEG:seg | : | : | : |
Description
BnaC06g41450DBnaC06g41450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6G2]
Coordinates
chrLK034092:-:3269..8142
Molecular Weight (calculated)
118533.0 Da
IEP (calculated)
9.139
GRAVY (calculated)
-0.078
Length
1065 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKLHCLIKLL ILKMSVNRRN WLKHGSNLRL VLLVLWLVCY VGYGQFEDTN DFNNPAVTQM VYSSLSNSTA ALNQELATKA KFCVKNLGAD WDKAFNFSAN
0101: LDFLRSCFQK TEGDFVRRIC TAAEMRFYSD EFLFKTDNPG YLKPKPNRNC NLTSWVSGCE PGWACSLDHQ VDLQDLPERT RNCMPCCEGF FCPNGLTCMI
0201: PCPRGSYCPL ATLNKTTGLC DPYAYQLPPG QLKRTCGGAN VWADHSRSDE VFCSAGYYCP TTTLKLPCER GHYCRMGSTS KKPCFKLTSC NSNSANLHAF
0301: GIMVICGVVT ILLIIYNCSD QILTTRERRQ AKSREAAVKK AKANQRWKVA RTAAKKHVTE ISEQISQTLS GKRTKNDGET HKMLDRVDSS SSPASSSSAV
0401: QPSFEIEDDA AGGSNKRPSG KRGKGPRIKN SQSQILKYAY NQIEKEKAME LENSDLTFSG IVNMATYSEM KRRTLLELSF QDLTLTLKSN GKHLLRCVTG
0501: TMKPGRITAV MGPSGAGKTS LLSALAGKAV GCNLSGLLLI NGKQLSIHSY KKIIGFVPQD DIVHGNLTVE ENIWFHARCR LPAGQSKAEK VLVVERVIDS
0601: LGLQGVRSSL VGTVEKRGIS GGQRKRVNVG LEMAMEPSIL FLDEPTSGLD SASSQLLLKA LKHEALEGVN ICMVVHQPSY TLFKTFNDLV LLAKGGLTVY
0701: HGPVENVEEY FSGLGIIVPE RINPPDYYID VLEGIVTNLN SDVSIKELPQ RWMLHEGYSV PLDMRKNNAN SAEPTFVREL LGDVTSNFRL RGDKIRHNFL
0801: KTRDLSYRTT PSMWLQYKYF LGRIAKQRMR EAKLQATDYL ILLLAGACLG SLIKASDESF GAPGYTYTII AVSLLCKITA LRSFSLDKLH YWRESASGMS
0901: SLASFLAKDT IDCFNTLVKP LVYLSMFYFF TNPRSTFLDH YIVLVCLVYC VTGIAYALAI FLQPGSAQLF SVLLPVVLTL VATRPHDSKA MKTIADLCYP
1001: KWALQAFVIR NAEKYSGVWM ITRCGALMKG GYDINEWNLC IMILLLIGVA TRMIAFVGMV ILQKR
0101: LDFLRSCFQK TEGDFVRRIC TAAEMRFYSD EFLFKTDNPG YLKPKPNRNC NLTSWVSGCE PGWACSLDHQ VDLQDLPERT RNCMPCCEGF FCPNGLTCMI
0201: PCPRGSYCPL ATLNKTTGLC DPYAYQLPPG QLKRTCGGAN VWADHSRSDE VFCSAGYYCP TTTLKLPCER GHYCRMGSTS KKPCFKLTSC NSNSANLHAF
0301: GIMVICGVVT ILLIIYNCSD QILTTRERRQ AKSREAAVKK AKANQRWKVA RTAAKKHVTE ISEQISQTLS GKRTKNDGET HKMLDRVDSS SSPASSSSAV
0401: QPSFEIEDDA AGGSNKRPSG KRGKGPRIKN SQSQILKYAY NQIEKEKAME LENSDLTFSG IVNMATYSEM KRRTLLELSF QDLTLTLKSN GKHLLRCVTG
0501: TMKPGRITAV MGPSGAGKTS LLSALAGKAV GCNLSGLLLI NGKQLSIHSY KKIIGFVPQD DIVHGNLTVE ENIWFHARCR LPAGQSKAEK VLVVERVIDS
0601: LGLQGVRSSL VGTVEKRGIS GGQRKRVNVG LEMAMEPSIL FLDEPTSGLD SASSQLLLKA LKHEALEGVN ICMVVHQPSY TLFKTFNDLV LLAKGGLTVY
0701: HGPVENVEEY FSGLGIIVPE RINPPDYYID VLEGIVTNLN SDVSIKELPQ RWMLHEGYSV PLDMRKNNAN SAEPTFVREL LGDVTSNFRL RGDKIRHNFL
0801: KTRDLSYRTT PSMWLQYKYF LGRIAKQRMR EAKLQATDYL ILLLAGACLG SLIKASDESF GAPGYTYTII AVSLLCKITA LRSFSLDKLH YWRESASGMS
0901: SLASFLAKDT IDCFNTLVKP LVYLSMFYFF TNPRSTFLDH YIVLVCLVYC VTGIAYALAI FLQPGSAQLF SVLLPVVLTL VATRPHDSKA MKTIADLCYP
1001: KWALQAFVIR NAEKYSGVWM ITRCGALMKG GYDINEWNLC IMILLLIGVA TRMIAFVGMV ILQKR
0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
Arabidopsis Description
ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.