Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71030 | Canola | plasma membrane | 86.76 | 98.85 |
| AT5G60740.1 | Thale cress | plasma membrane | 94.67 | 92.88 |
| CDY36779 | Canola | plasma membrane | 90.81 | 92.42 |
| KRH25067 | Soybean | plasma membrane | 70.77 | 70.58 |
| KRH30616 | Soybean | plasma membrane | 70.68 | 70.04 |
| VIT_06s0004g02490.t01 | Wine grape | plasma membrane | 69.3 | 68.61 |
| Solyc11g069820.1.1 | Tomato | plasma membrane | 65.44 | 65.14 |
| PGSC0003DMT400031316 | Potato | mitochondrion, plastid | 62.68 | 63.62 |
| CDX91328 | Canola | plasma membrane | 61.86 | 62.26 |
| CDX74994 | Canola | plasma membrane | 61.86 | 62.26 |
| Solyc06g075020.2.1 | Tomato | plasma membrane | 62.13 | 61.79 |
| CDY25855 | Canola | plasma membrane | 55.79 | 58.53 |
| CDY62072 | Canola | endoplasmic reticulum, golgi, plasma membrane | 56.43 | 57.65 |
| CDY51880 | Canola | plasma membrane | 55.79 | 57.59 |
| CDY62076 | Canola | plasma membrane | 57.44 | 57.55 |
| CDY24100 | Canola | plasma membrane | 57.26 | 57.37 |
| CDY24098 | Canola | plasma membrane | 55.7 | 56.9 |
| CDY70653 | Canola | extracellular, golgi, vacuole | 16.08 | 49.44 |
| CDY30512 | Canola | cytosol | 9.74 | 25.67 |
| CDY26211 | Canola | cytosol, peroxisome, plasma membrane | 14.61 | 23.52 |
| CDY49810 | Canola | plasma membrane | 13.51 | 23.33 |
| CDY19179 | Canola | cytosol, peroxisome, plasma membrane | 14.43 | 23.22 |
| CDX96749 | Canola | cytosol, peroxisome, plasma membrane | 14.43 | 23.19 |
| CDX83888 | Canola | cytosol, peroxisome, plasma membrane | 14.43 | 23.12 |
| CDX87823 | Canola | nucleus, peroxisome, plasma membrane | 14.34 | 23.04 |
| CDY43913 | Canola | nucleus, peroxisome, plasma membrane | 14.52 | 22.83 |
| CDY22844 | Canola | plastid | 13.14 | 22.7 |
| CDY06406 | Canola | peroxisome | 13.88 | 22.24 |
| CDY61513 | Canola | golgi, mitochondrion, peroxisome, plasma membrane | 12.5 | 21.59 |
| CDX77150 | Canola | plastid | 13.51 | 20.14 |
| CDX71393 | Canola | plastid | 13.97 | 19.05 |
| CDY04533 | Canola | mitochondrion | 13.97 | 18.63 |
| CDY18337 | Canola | plasma membrane | 2.11 | 9.31 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | GO:A0A078FC16 | UniProt:A0A078FC16 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EnsemblPlants:CDY11955 | ProteinID:CDY11955 | ProteinID:CDY11955.1 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00060804001 | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF01061 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 |
| PANTHER:PTHR19241:SF435 | SMART:SM00382 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EE3DB9 |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g13810DBnaC03g13810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FC16]
Coordinates
chrLK032015:-:606457..612531
Molecular Weight (calculated)
121141.0 Da
IEP (calculated)
9.033
GRAVY (calculated)
-0.159
Length
1088 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGRRKLCFQE TFVSFFVSLV FIFHRGVICQ DDSSLDNPAA NRLYNQFVFD KISNLTEVFE DDIKRELGFC ITNVKEDYNE AFNFSSKPGF LNKCGKTTKG
0101: DMMQRICTAA EVRIYFNGLL GGAKRATNYL KPNKNCNLSS WMSGCEPGWA CRTAKDVKVD LKDDKNVPVR TQQCAPCCAG FFCPRGITCM IPCPLGAYCP
0201: EAKLNRTTGL CDPYHYQLPS GQPNHTCGGA DIWADIVSSS EVFCSAGSFC PSTIDKLPCT RGHFCRTGST AEKNCFKLAT CNPRSTNQNI TAYGIMLFAG
0301: LGFLLIILYN CSDQVLATRE RRQAKSREKA VQSVRETQTQ EKWKSAKDIA KKHATELQQS FSRTFSRRKS MKQPDLMRGG SSDTTKKGKK KDKNKLTEML
0401: QDIEQNPGDT EGFKLEIGDK NIKKHAPKGK SLHTQSQMFR YAYGQIEKEK AMQEQNKNLT FSGVISMAND IEIRKRPTIE VAFKDLTITL KGKNKHLMRC
0501: VTGKLSPGRV SAVMGPSGAG KTTFLTALTG KAAGCTMTGM ILVNGKVESI QSYKRIIGFV PQDDIVHGNL TVEENLWFSA RCRLPADLPK PEKVLVVERV
0601: IESLGLQHVR DSMVGTVEKR GISGGQRKRV NVGLEMVMEP SLLILDEPTS GLDSSSSQLL LRALRREALE GVNICMVVHQ PSYTLFRMFD DLILLAKGGL
0701: ICYQGSVKKV EEYFSSLGIV VPERVNPPDY YIDILEGILK PSTSSGVTYK QLPVRWMLHN GYPVPSDMLK SIEGMASAEN SAHGGSAHGS VVGDDGTSFA
0801: GEFWQDVKAN VEIKKDTLQN NFSNSGDLSQ RQVPGVYQQF RYFLGRLGKQ RLREARTLAV DYLILLLAGI CLGTLAKVSD ETFGAMGYTY TVIAVSLLCK
0901: ITALRSFSLD KLHYWRESRA GMSSLAYFLA KDTVDHFNTI VKPLVYLSMF YFFNNPRSSV GDNYIVLICL VYCVTGIAFA LAILFEPGPA QLWSVLLPVV
1001: LTLIATSTND NKIVESISEL CYTRWALEAF VVSNAQRYKG VWLITRCGSL MENGYNIKHF PRCLIFLTLT GILSRCAAFF CMVTFQKK
0101: DMMQRICTAA EVRIYFNGLL GGAKRATNYL KPNKNCNLSS WMSGCEPGWA CRTAKDVKVD LKDDKNVPVR TQQCAPCCAG FFCPRGITCM IPCPLGAYCP
0201: EAKLNRTTGL CDPYHYQLPS GQPNHTCGGA DIWADIVSSS EVFCSAGSFC PSTIDKLPCT RGHFCRTGST AEKNCFKLAT CNPRSTNQNI TAYGIMLFAG
0301: LGFLLIILYN CSDQVLATRE RRQAKSREKA VQSVRETQTQ EKWKSAKDIA KKHATELQQS FSRTFSRRKS MKQPDLMRGG SSDTTKKGKK KDKNKLTEML
0401: QDIEQNPGDT EGFKLEIGDK NIKKHAPKGK SLHTQSQMFR YAYGQIEKEK AMQEQNKNLT FSGVISMAND IEIRKRPTIE VAFKDLTITL KGKNKHLMRC
0501: VTGKLSPGRV SAVMGPSGAG KTTFLTALTG KAAGCTMTGM ILVNGKVESI QSYKRIIGFV PQDDIVHGNL TVEENLWFSA RCRLPADLPK PEKVLVVERV
0601: IESLGLQHVR DSMVGTVEKR GISGGQRKRV NVGLEMVMEP SLLILDEPTS GLDSSSSQLL LRALRREALE GVNICMVVHQ PSYTLFRMFD DLILLAKGGL
0701: ICYQGSVKKV EEYFSSLGIV VPERVNPPDY YIDILEGILK PSTSSGVTYK QLPVRWMLHN GYPVPSDMLK SIEGMASAEN SAHGGSAHGS VVGDDGTSFA
0801: GEFWQDVKAN VEIKKDTLQN NFSNSGDLSQ RQVPGVYQQF RYFLGRLGKQ RLREARTLAV DYLILLLAGI CLGTLAKVSD ETFGAMGYTY TVIAVSLLCK
0901: ITALRSFSLD KLHYWRESRA GMSSLAYFLA KDTVDHFNTI VKPLVYLSMF YFFNNPRSSV GDNYIVLICL VYCVTGIAFA LAILFEPGPA QLWSVLLPVV
1001: LTLIATSTND NKIVESISEL CYTRWALEAF VVSNAQRYKG VWLITRCGSL MENGYNIKHF PRCLIFLTLT GILSRCAAFF CMVTFQKK
0001: MGRRNSYFPG NFVPLFFVFI VLILQQERVI CQEDRSLDNP AANRLYNQFV FDKISNLTEV FEDDIKRELG FCITNVKEDY NEAFNFSTKP DFLNACGKTT
0101: KGDMMQRICT AAEVRIYFNG LLGGAKRATN YLKPNKNCNL SSWMSGCEPG WACRTAKDVK VDLKDDKNVP VRTQQCAPCC AGFFCPRGIT CMIPCPLGAY
0201: CPEANLNRTT GLCDPYHYQL PSGQPNHTCG GADIWADIGS SSEVFCSAGS FCPSTIDKLP CTKGHYCRTG STAELNCFKL ATCNPRSTNQ NITAYGIMLF
0301: AGLGFLLIIL YNCSDQVLAT RERRQAKSRE KAVQSVRDSQ SREKWKSAKD IAKKHATELQ QSFSRTFSRR KSMKQPDLMR GLSQAKPGSD AALPPMLGSS
0401: SDTKKGKKKE KNKLTEMLHD IEQNPEDPEG FNLEIGDKNI KKHAPKGKAL HTQSQMFRYA YGQIEKEKAM QEQNKNLTFS GVISMANDID IRKRPMIEVA
0501: FKDLSITLKG KNKHLMRCVT GKLSPGRVSA VMGPSGAGKT TFLTALTGKA PGCIMTGMIL VNGKVESIQS YKKIIGFVPQ DDIVHGNLTV EENLWFSARC
0601: RLPADLPKPE KVLVVERVIE SLGLQHVRDS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LILDEPTSGL DSSSSQLLLR ALRREALEGV NICMVVHQPS
0701: YTLFRMFDDL ILLAKGGLIC YQGPVKKVEE YFSSLGIVVP ERVNPPDYYI DILEGILKPS TSSGVTYKQL PVRWMLHNGY PVPMDMLKSI EGMASSASGE
0801: NSAHGGSAHG SVVGDDGTSF AGEFWQDVKA NVEIKKDNLQ NNFSSSGDLS EREVPGVYQQ YRYFLGRLGK QRLREARTLA VDYLILLLAG ICLGTLAKVS
0901: DETFGAMGYT YTVIAVSLLC KITALRSFSL DKLHYWRESR AGMSSLAYFL AKDTVDHFNT IVKPLVYLSM FYFFNNPRST VTDNYVVLIC LVYCVTGIAY
1001: TLAILFEPGP AQLWSVLLPV VLTLIATSTN DNKIVDSISE LCYTRWALEA FVVSNAQRYK GVWLITRCGS LMENGYNIKH FPRCLVFLTL TGILSRCAAF
1101: FCMVTFQKK
0101: KGDMMQRICT AAEVRIYFNG LLGGAKRATN YLKPNKNCNL SSWMSGCEPG WACRTAKDVK VDLKDDKNVP VRTQQCAPCC AGFFCPRGIT CMIPCPLGAY
0201: CPEANLNRTT GLCDPYHYQL PSGQPNHTCG GADIWADIGS SSEVFCSAGS FCPSTIDKLP CTKGHYCRTG STAELNCFKL ATCNPRSTNQ NITAYGIMLF
0301: AGLGFLLIIL YNCSDQVLAT RERRQAKSRE KAVQSVRDSQ SREKWKSAKD IAKKHATELQ QSFSRTFSRR KSMKQPDLMR GLSQAKPGSD AALPPMLGSS
0401: SDTKKGKKKE KNKLTEMLHD IEQNPEDPEG FNLEIGDKNI KKHAPKGKAL HTQSQMFRYA YGQIEKEKAM QEQNKNLTFS GVISMANDID IRKRPMIEVA
0501: FKDLSITLKG KNKHLMRCVT GKLSPGRVSA VMGPSGAGKT TFLTALTGKA PGCIMTGMIL VNGKVESIQS YKKIIGFVPQ DDIVHGNLTV EENLWFSARC
0601: RLPADLPKPE KVLVVERVIE SLGLQHVRDS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LILDEPTSGL DSSSSQLLLR ALRREALEGV NICMVVHQPS
0701: YTLFRMFDDL ILLAKGGLIC YQGPVKKVEE YFSSLGIVVP ERVNPPDYYI DILEGILKPS TSSGVTYKQL PVRWMLHNGY PVPMDMLKSI EGMASSASGE
0801: NSAHGGSAHG SVVGDDGTSF AGEFWQDVKA NVEIKKDNLQ NNFSSSGDLS EREVPGVYQQ YRYFLGRLGK QRLREARTLA VDYLILLLAG ICLGTLAKVS
0901: DETFGAMGYT YTVIAVSLLC KITALRSFSL DKLHYWRESR AGMSSLAYFL AKDTVDHFNT IVKPLVYLSM FYFFNNPRST VTDNYVVLIC LVYCVTGIAY
1001: TLAILFEPGP AQLWSVLLPV VLTLIATSTN DNKIVDSISE LCYTRWALEA FVVSNAQRYK GVWLITRCGS LMENGYNIKH FPRCLVFLTL TGILSRCAAF
1101: FCMVTFQKK
Arabidopsis Description
ABCG28ABC transporter G family member 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF46]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.