Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0040g01620.t01 | Wine grape | cytosol | 73.61 | 72.69 |
| KRH25067 | Soybean | plasma membrane | 70.52 | 71.04 |
| KRH30616 | Soybean | plasma membrane | 70.25 | 70.31 |
| CDX71030 | Canola | plasma membrane | 60.69 | 69.84 |
| CDY11955 | Canola | plasma membrane | 68.61 | 69.3 |
| AT5G60740.1 | Thale cress | plasma membrane | 69.43 | 68.8 |
| Solyc11g069820.1.1 | Tomato | plasma membrane | 67.79 | 68.16 |
| VIT_13s0019g04600.t01 | Wine grape | plasma membrane | 68.33 | 67.05 |
| CDY36779 | Canola | plasma membrane | 64.33 | 66.14 |
| PGSC0003DMT400031316 | Potato | mitochondrion, plastid | 63.79 | 65.39 |
| Bra028945.1-P | Field mustard | plasma membrane | 67.79 | 64.95 |
| Solyc06g075020.2.1 | Tomato | plasma membrane | 64.06 | 64.35 |
| VIT_06s0061g00250.t01 | Wine grape | cytosol | 10.19 | 31.64 |
| VIT_06s0009g00530.t01 | Wine grape | mitochondrion | 4.73 | 27.96 |
| VIT_06s0061g00260.t01 | Wine grape | cytosol | 15.65 | 25.22 |
| VIT_16s0039g00010.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 16.11 | 25.11 |
| VIT_03s0017g01320.t01 | Wine grape | plasma membrane | 14.47 | 24.65 |
| VIT_06s0061g00230.t01 | Wine grape | plasma membrane | 13.83 | 24.44 |
| VIT_07s0191g00010.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 13.83 | 24.17 |
| VIT_03s0017g01290.t01 | Wine grape | cytosol | 13.83 | 23.6 |
| VIT_06s0061g00240.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 15.47 | 23.38 |
| VIT_03s0017g01300.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 14.19 | 23.15 |
| VIT_03s0017g01280.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 14.01 | 22.78 |
| VIT_06s0061g00350.t01 | Wine grape | plastid | 14.1 | 21.47 |
| VIT_00s0625g00020.t01 | Wine grape | plastid | 14.47 | 21.46 |
| VIT_00s0625g00050.t01 | Wine grape | cytosol | 11.1 | 18.97 |
| VIT_00s0989g00010.t01 | Wine grape | plastid | 15.29 | 18.86 |
| VIT_00s0822g00010.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 3.18 | 14.4 |
Protein Annotations
| EntrezGene:100853718 | wikigene:100853718 | MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | ProteinID:CCB43693 | ProteinID:CCB43693.1 | UniProt:F6GU29 | EMBL:FN594951 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | EntrezGene:LOC100853718 |
| wikigene:LOC100853718 | InterPro:P-loop_NTPase | PFAM:PF00005 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 |
| PANTHER:PTHR19241:SF445 | SMART:SM00382 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00015C81CF |
| ArrayExpress:VIT_06s0004g02490 | EnsemblPlantsGene:VIT_06s0004g02490 | EnsemblPlants:VIT_06s0004g02490.t01 | RefSeq:XP_003632162 | RefSeq:XP_003632162.1 | RefSeq:XP_010651209.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:2981734..2995237
Molecular Weight (calculated)
121647.0 Da
IEP (calculated)
9.102
GRAVY (calculated)
-0.057
Length
1099 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSNANPALCV FMIIAVAWSI PKSVICQDES ELSNTPAGVN LFTSTIFNRF SNFTTVFRDE IKKHLKFCIK NVDADWDSAF NFTSDTTFLS NCIRKTKGDI
0101: MQRLCTAAEI KLYFNSFYSG ESRSTNYLKL NKNCNLTSWV SGCEPGWACS VGPNKKVDLK NVQDLPDRTT DCTTCCEGFF CPHGLTCMIP CPLGSYCPLA
0201: KLNKATGICE PYNYQLPPGQ QNRSCGGADI WADIGSSSEI FCSAGSYCPS TIKKIPCSSG YYCRIGSTSQ KRCFRMTTCD KNSANQNITA YGVLLFVGLC
0301: IILICVYNCS DQVLTTRERK QAQSREAAAR SARETAQARE KWKSAKDVAK KHAIGLQAQL SRTFSRVKSS RQPDKMKISG PLPGTDAALP PMPLDTSSAS
0401: AASEGKKKGK SNLAKMVHAL EEDPESHEGF NLEIGDKNLK KNMPKAKQLH THSQIFKYAY GQIEKEKALQ EQQMNLTFSG VVSMANDIEV RPRPMIEVAF
0501: KDLTLTLKGK HKHLMRCVTG KIMPGRVSAV MGPSGAGKTT FLSALAGKPT GCTMTGSILI NGKVESMHSY KKIIGFVPQD DIVHGNLTVQ ENLWFSARCR
0601: LSAGLPKQEK VLVVERVIES LGLQPVRDSL VGTVEKRGIS GGQRKRVNVG LEMVMEPSLL ILDEPTSGLD SSSSQLLLRA LRREALEGVN VCMVVHQPSY
0701: TLFRMFDDLI LLAKGGLTVY HGSVKKVEEY FAELGIKVPD RVNPPDHFID ILEGIVKPSS STAVDQKQLP VRWMLHNGYP VPLDMQQAAG LTAFTNAGSS
0801: DVAHSEKQSF VGEIWQDVVS DVALKKDYIQ NNFFKSKDLS NRVTAGVLQQ YKYFLGRVGK QRLREARILA VDYLILLLAG ICLGTLAKVS DATFGALGYN
0901: YTVIAVSLLC KIGALRSFSL DKLHYWRERA SGMSSLAYFL SKDTVDHLNT IIKPLVYLSM FYFFNNPRSS FPDNYFILLC LVYCVTGIAY LFAIVFEPGP
1001: AQLWSVLLPV VLTLIATQQN QSGFIKKLSD LCYTKWALEA FVIANTKRYS GVWLITRCGS LMKSGYDLNN WALCLSNLII AGIISRVLAF FLMVLFHKK
0101: MQRLCTAAEI KLYFNSFYSG ESRSTNYLKL NKNCNLTSWV SGCEPGWACS VGPNKKVDLK NVQDLPDRTT DCTTCCEGFF CPHGLTCMIP CPLGSYCPLA
0201: KLNKATGICE PYNYQLPPGQ QNRSCGGADI WADIGSSSEI FCSAGSYCPS TIKKIPCSSG YYCRIGSTSQ KRCFRMTTCD KNSANQNITA YGVLLFVGLC
0301: IILICVYNCS DQVLTTRERK QAQSREAAAR SARETAQARE KWKSAKDVAK KHAIGLQAQL SRTFSRVKSS RQPDKMKISG PLPGTDAALP PMPLDTSSAS
0401: AASEGKKKGK SNLAKMVHAL EEDPESHEGF NLEIGDKNLK KNMPKAKQLH THSQIFKYAY GQIEKEKALQ EQQMNLTFSG VVSMANDIEV RPRPMIEVAF
0501: KDLTLTLKGK HKHLMRCVTG KIMPGRVSAV MGPSGAGKTT FLSALAGKPT GCTMTGSILI NGKVESMHSY KKIIGFVPQD DIVHGNLTVQ ENLWFSARCR
0601: LSAGLPKQEK VLVVERVIES LGLQPVRDSL VGTVEKRGIS GGQRKRVNVG LEMVMEPSLL ILDEPTSGLD SSSSQLLLRA LRREALEGVN VCMVVHQPSY
0701: TLFRMFDDLI LLAKGGLTVY HGSVKKVEEY FAELGIKVPD RVNPPDHFID ILEGIVKPSS STAVDQKQLP VRWMLHNGYP VPLDMQQAAG LTAFTNAGSS
0801: DVAHSEKQSF VGEIWQDVVS DVALKKDYIQ NNFFKSKDLS NRVTAGVLQQ YKYFLGRVGK QRLREARILA VDYLILLLAG ICLGTLAKVS DATFGALGYN
0901: YTVIAVSLLC KIGALRSFSL DKLHYWRERA SGMSSLAYFL SKDTVDHLNT IIKPLVYLSM FYFFNNPRSS FPDNYFILLC LVYCVTGIAY LFAIVFEPGP
1001: AQLWSVLLPV VLTLIATQQN QSGFIKKLSD LCYTKWALEA FVIANTKRYS GVWLITRCGS LMKSGYDLNN WALCLSNLII AGIISRVLAF FLMVLFHKK
0001: MGRRNSYFPG NFVPLFFVFI VLILQQERVI CQEDRSLDNP AANRLYNQFV FDKISNLTEV FEDDIKRELG FCITNVKEDY NEAFNFSTKP DFLNACGKTT
0101: KGDMMQRICT AAEVRIYFNG LLGGAKRATN YLKPNKNCNL SSWMSGCEPG WACRTAKDVK VDLKDDKNVP VRTQQCAPCC AGFFCPRGIT CMIPCPLGAY
0201: CPEANLNRTT GLCDPYHYQL PSGQPNHTCG GADIWADIGS SSEVFCSAGS FCPSTIDKLP CTKGHYCRTG STAELNCFKL ATCNPRSTNQ NITAYGIMLF
0301: AGLGFLLIIL YNCSDQVLAT RERRQAKSRE KAVQSVRDSQ SREKWKSAKD IAKKHATELQ QSFSRTFSRR KSMKQPDLMR GLSQAKPGSD AALPPMLGSS
0401: SDTKKGKKKE KNKLTEMLHD IEQNPEDPEG FNLEIGDKNI KKHAPKGKAL HTQSQMFRYA YGQIEKEKAM QEQNKNLTFS GVISMANDID IRKRPMIEVA
0501: FKDLSITLKG KNKHLMRCVT GKLSPGRVSA VMGPSGAGKT TFLTALTGKA PGCIMTGMIL VNGKVESIQS YKKIIGFVPQ DDIVHGNLTV EENLWFSARC
0601: RLPADLPKPE KVLVVERVIE SLGLQHVRDS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LILDEPTSGL DSSSSQLLLR ALRREALEGV NICMVVHQPS
0701: YTLFRMFDDL ILLAKGGLIC YQGPVKKVEE YFSSLGIVVP ERVNPPDYYI DILEGILKPS TSSGVTYKQL PVRWMLHNGY PVPMDMLKSI EGMASSASGE
0801: NSAHGGSAHG SVVGDDGTSF AGEFWQDVKA NVEIKKDNLQ NNFSSSGDLS EREVPGVYQQ YRYFLGRLGK QRLREARTLA VDYLILLLAG ICLGTLAKVS
0901: DETFGAMGYT YTVIAVSLLC KITALRSFSL DKLHYWRESR AGMSSLAYFL AKDTVDHFNT IVKPLVYLSM FYFFNNPRST VTDNYVVLIC LVYCVTGIAY
1001: TLAILFEPGP AQLWSVLLPV VLTLIATSTN DNKIVDSISE LCYTRWALEA FVVSNAQRYK GVWLITRCGS LMENGYNIKH FPRCLVFLTL TGILSRCAAF
1101: FCMVTFQKK
0101: KGDMMQRICT AAEVRIYFNG LLGGAKRATN YLKPNKNCNL SSWMSGCEPG WACRTAKDVK VDLKDDKNVP VRTQQCAPCC AGFFCPRGIT CMIPCPLGAY
0201: CPEANLNRTT GLCDPYHYQL PSGQPNHTCG GADIWADIGS SSEVFCSAGS FCPSTIDKLP CTKGHYCRTG STAELNCFKL ATCNPRSTNQ NITAYGIMLF
0301: AGLGFLLIIL YNCSDQVLAT RERRQAKSRE KAVQSVRDSQ SREKWKSAKD IAKKHATELQ QSFSRTFSRR KSMKQPDLMR GLSQAKPGSD AALPPMLGSS
0401: SDTKKGKKKE KNKLTEMLHD IEQNPEDPEG FNLEIGDKNI KKHAPKGKAL HTQSQMFRYA YGQIEKEKAM QEQNKNLTFS GVISMANDID IRKRPMIEVA
0501: FKDLSITLKG KNKHLMRCVT GKLSPGRVSA VMGPSGAGKT TFLTALTGKA PGCIMTGMIL VNGKVESIQS YKKIIGFVPQ DDIVHGNLTV EENLWFSARC
0601: RLPADLPKPE KVLVVERVIE SLGLQHVRDS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LILDEPTSGL DSSSSQLLLR ALRREALEGV NICMVVHQPS
0701: YTLFRMFDDL ILLAKGGLIC YQGPVKKVEE YFSSLGIVVP ERVNPPDYYI DILEGILKPS TSSGVTYKQL PVRWMLHNGY PVPMDMLKSI EGMASSASGE
0801: NSAHGGSAHG SVVGDDGTSF AGEFWQDVKA NVEIKKDNLQ NNFSSSGDLS EREVPGVYQQ YRYFLGRLGK QRLREARTLA VDYLILLLAG ICLGTLAKVS
0901: DETFGAMGYT YTVIAVSLLC KITALRSFSL DKLHYWRESR AGMSSLAYFL AKDTVDHFNT IVKPLVYLSM FYFFNNPRST VTDNYVVLIC LVYCVTGIAY
1001: TLAILFEPGP AQLWSVLLPV VLTLIATSTN DNKIVDSISE LCYTRWALEA FVVSNAQRYK GVWLITRCGS LMENGYNIKH FPRCLVFLTL TGILSRCAAF
1101: FCMVTFQKK
Arabidopsis Description
ABCG28ABC transporter G family member 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF46]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.