Factsheet for VIT_03s0017g01320.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0191g00010.t01	Wine grape	peroxisome, plasma membrane, vacuole	67.13	68.84
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.5	65.02
VIT_03s0017g01290.t01	Wine grape	cytosol	63.57	63.66
VIT_03s0017g01280.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	65.12	62.13
VIT_03s0017g01300.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	64.65	61.87
VIT_00s0625g00020.t01	Wine grape	plastid	68.68	59.78
VIT_06s0009g00530.t01	Wine grape	mitochondrion	15.97	55.38
VIT_00s0625g00050.t01	Wine grape	cytosol	55.04	55.21
VIT_00s0989g00010.t01	Wine grape	plastid	68.84	49.83
VIT_06s0061g00230.t01	Wine grape	plasma membrane	45.43	47.11
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	51.32	46.95
VIT_06s0061g00260.t01	Wine grape	cytosol	46.82	44.28
VIT_06s0061g00250.t01	Wine grape	cytosol	23.1	42.09
VIT_06s0061g00240.t01	Wine grape	cytosol, peroxisome, plasma membrane	43.72	38.79
VIT_06s0061g00350.t01	Wine grape	plastid	38.14	34.07
VIT_06s0004g02490.t01	Wine grape	plasma membrane	24.65	14.47
VIT_08s0040g01620.t01	Wine grape	cytosol	24.5	14.2
VIT_13s0019g04600.t01	Wine grape	plasma membrane	23.57	13.57

Protein Annotations

EntrezGene:100251372	wikigene:100251372	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:AM461000	ProteinID:CAN72387	ProteinID:CAN72387.1	ProteinID:CBI34073
ProteinID:CBI34073.3	ncoils:Coil	UniProt:D7TU99	EMBL:FN596248	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EntrezGene:LOC100251372	wikigene:LOC100251372
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF321	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0001BE40E9	ArrayExpress:VIT_03s0017g01320
EnsemblPlantsGene:VIT_03s0017g01320	EnsemblPlants:VIT_03s0017g01320.t01	RefSeq:XP_002270209	RefSeq:XP_002270209.2	SEG:seg	:

Description

No Description!

Coordinates

chr3:-:17271807..17276119

Molecular Weight (calculated)

72243.6 Da

IEP (calculated)

8.600

GRAVY (calculated)

0.122

Length

645 amino acids

Sequence
(BLAST)

001: MASPPPMRGL KEENGEKADE KMGVYVTWKE LSVTVSNGSK FILQGLTGYA QPSQVLAIMG PSGSGKSTLL DALAGRLDSR TRHTGEILIN GRKQWSAYGT
101: MAYVTQDDTL TWTLTVREAV FYSAQLQLPK SMSISEKKER SETTIREMGL QDSMDTRIGG WGSKGLSGGQ KRRVSICIEI LTRPKLLFLD EPTSGLDSAA
201: SYFVMRRIVD LAQQNGMTII ASIHQPSSEV FELFPNLCLL SSGRTIYFGP SHCANEFFAL NGFPCPVLQN PSDHYLRTIN TDFDEDIEQG ISGKKTTEEV
301: INMLAKSYEL SDTCKQIKRQ VAEICRQGGG ELEKKGSQAS FITQCLILTR RSFLNMHRDL GYYWLRLVIY VTLGLGLGTV FYDVGAGYES IRARGSMIMF
401: VVSFLTIMAI GGFPSFVEEM KVFRRERLNG HYGPGAFVIG NTFSSMPFLL IISLIPGAIT YYLVGLQQGG KCFVYFVTVL FTCMLLVESL MMIVASIMPN
501: FLMGLITGAG IQGLMILSAG FFRLPSDLPK LLWRYPLYYI AFHKYAYQGL YKNEFEGLTF PSNEALGHPT TINGDKILRD IWQVEMGYSK WIDLAILFAM
601: VVVYRLVFFV IIKIFEIIKI VIENGFSKLL IQKIQCHMIS KQLQN

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.