Factsheet for VIT_06s0009g00530.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 5
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032669	Potato	mitochondrion	33.87	56.25
VIT_07s0191g00010.t01	Wine grape	peroxisome, plasma membrane, vacuole	68.82	20.35
VIT_06s0061g00250.t01	Wine grape	cytosol	37.63	19.77
VIT_00s0625g00020.t01	Wine grape	plastid	73.66	18.49
KRH18188	Soybean	cytosol	60.22	17.64
VIT_03s0017g01280.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	63.98	17.6
KRH42130	Soybean	plasma membrane	59.68	17.32
VIT_03s0017g01290.t01	Wine grape	cytosol	59.14	17.08
VIT_03s0017g01300.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	60.22	16.62
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	59.14	16.22
KRH18182	Soybean	cytosol	58.6	16.12
VIT_03s0017g01320.t01	Wine grape	plasma membrane	55.38	15.97
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	58.6	15.82
KRH42131	Soybean	cytosol, nucleus, plasma membrane	58.6	15.59
KRH42133	Soybean	extracellular	58.06	15.54
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	56.99	15.3
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	51.08	14.42
KRH42124	Soybean	cytosol	52.15	14.35
KRH42128	Soybean	plasma membrane	47.85	14.29
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	33.33	14.09
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	51.61	13.99
VIT_00s0989g00010.t01	Wine grape	plastid	63.98	13.36
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	44.62	11.77
VIT_06s0061g00260.t01	Wine grape	cytosol	39.25	10.7
VIT_06s0061g00240.t01	Wine grape	cytosol, peroxisome, plasma membrane	36.02	9.22
VIT_06s0061g00230.t01	Wine grape	plasma membrane	30.11	9.0
VIT_06s0061g00350.t01	Wine grape	plastid	34.95	9.0
VIT_00s0625g00050.t01	Wine grape	cytosol	25.81	7.47
VIT_06s0004g02490.t01	Wine grape	plasma membrane	27.96	4.73
VIT_08s0040g01620.t01	Wine grape	cytosol	27.42	4.58
VIT_13s0019g04600.t01	Wine grape	plasma membrane	27.42	4.55
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	0.0	0.0

Protein Annotations

EntrezGene:100853362	wikigene:100853362	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ABC_transporter-like	ProteinID:CBI24424
ProteinID:CBI24424.3	UniProt:D7T1P4	EMBL:FN595504	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EntrezGene:LOC100853362	wikigene:LOC100853362	InterPro:P-loop_NTPase
PFAM:PF00005	PANTHER:PTHR19241	PANTHER:PTHR19241:SF229	SUPFAM:SSF52540	UniParc:UPI0001BE23F0	ArrayExpress:VIT_06s0009g00530
EnsemblPlantsGene:VIT_06s0009g00530	EnsemblPlants:VIT_06s0009g00530.t01	RefSeq:XP_003632217	RefSeq:XP_003632217.1	:	:

Description

No Description!

Coordinates

chr6:+:11148009..11148572

Molecular Weight (calculated)

20223.5 Da

IEP (calculated)

9.883

GRAVY (calculated)

-0.173

Length

186 amino acids

Sequence
(BLAST)

001: MKAAMIRAPT FLLRIHASLH WSDLFPANPC KTHVKPWFPP PIGLNGVFLT WKDLWVTVSD GESGHRAILQ GLAGYAQPGE ALAIMGPSGC GKSTLLDALA
101: GRLASNTRQS GEILVNGSKQ RLAFGTSAYV TQDDTLMTTL TVRKAVYHSA QLQLPDSMSR SEKKERAEMT IREMGLQDAM NTRIGG

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.