Factsheet for VIT_06s0061g00250.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0009g00530.t01	Wine grape	mitochondrion	19.77	37.63
VIT_06s0061g00240.t01	Wine grape	cytosol, peroxisome, plasma membrane	75.99	37.0
VIT_06s0061g00260.t01	Wine grape	cytosol	68.36	35.48
VIT_06s0061g00230.t01	Wine grape	plasma membrane	59.6	33.92
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	56.78	28.51
VIT_07s0191g00010.t01	Wine grape	peroxisome, plasma membrane, vacuole	43.5	24.48
VIT_03s0017g01300.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	45.76	24.04
VIT_03s0017g01290.t01	Wine grape	cytosol	43.5	23.91
VIT_03s0017g01320.t01	Wine grape	plasma membrane	42.09	23.1
VIT_03s0017g01280.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	43.79	22.93
VIT_00s0625g00020.t01	Wine grape	plastid	44.63	21.32
VIT_06s0061g00350.t01	Wine grape	plastid	37.57	18.42
VIT_00s0625g00050.t01	Wine grape	cytosol	33.05	18.2
VIT_00s0989g00010.t01	Wine grape	plastid	44.63	17.73
VIT_06s0004g02490.t01	Wine grape	plasma membrane	31.64	10.19
VIT_08s0040g01620.t01	Wine grape	cytosol	30.79	9.79
VIT_13s0019g04600.t01	Wine grape	plasma membrane	30.51	9.64
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	0.56	0.82

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:CCB44245
ProteinID:CCB44245.1	UniProt:F6GWB0	EMBL:FN594957	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF338	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000210A8F2
ArrayExpress:VIT_06s0061g00250	EnsemblPlantsGene:VIT_06s0061g00250	EnsemblPlants:VIT_06s0061g00250.t01	RefSeq:XP_002274065	RefSeq:XP_002274065.1	SEG:seg

Description

No Description!

Coordinates

chr6:+:17528718..17554303

Molecular Weight (calculated)

38554.2 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.123

Length

354 amino acids

Sequence
(BLAST)

001: MEIEVEDGDG GSGSRGGNVG VVAHLVWEDL TVVVPSFGSG ATRRVLQGLS GYAEPGRLMA VMGPSGSGKS TLLDSLAGRL SRNVILSGNV VLNGKKRSLD
101: HDGVAYVTQE DVLLGTLTVK ETLTYSAQLR LPTIMTKEKV NSIVEETIKE MGLEHCADQL IGSWHLRGIS SGEKKRLSIA LEILTQPHLL LLDEPTSGLD
201: NASAFFITQT LKNAAFNGRT VISSIHQPSS EVFALLDDLL LLSNGETVYF GEAKMALQFF AEAGFPCPSR RNPSDHFLHC TNSSFDTVRS TLIRSHKMHE
301: PEQSSDSLMN LGAVEIKATL IEKYNCSKYA TKTRSRIREI SNTVRNLSII YELN

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.