Factsheet for VIT_00s0625g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plasma membrane 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	58.48	70.94
VIT_07s0191g00010.t01	Wine grape	peroxisome, plasma membrane, vacuole	65.94	67.41
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.35	67.08
VIT_00s0625g00020.t01	Wine grape	plastid	66.41	57.62
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	55.83	55.66
VIT_03s0017g01290.t01	Wine grape	cytosol	55.52	55.43
VIT_03s0017g01320.t01	Wine grape	plasma membrane	55.21	55.04
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	55.37	54.85
VIT_00s0989g00010.t01	Wine grape	plastid	74.65	53.87
PGSC0003DMT400043270	Potato	cytosol	54.28	53.53
VIT_03s0017g01280.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	55.52	52.81
VIT_03s0017g01300.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	54.9	52.37
VIT_06s0061g00230.t01	Wine grape	plasma membrane	41.06	42.44
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	44.32	40.43
VIT_06s0061g00260.t01	Wine grape	cytosol	40.44	38.12
VIT_06s0061g00240.t01	Wine grape	cytosol, peroxisome, plasma membrane	38.1	33.7
VIT_06s0061g00250.t01	Wine grape	cytosol	18.2	33.05
VIT_06s0061g00350.t01	Wine grape	plastid	31.57	28.12
VIT_06s0009g00530.t01	Wine grape	mitochondrion	7.47	25.81
VIT_06s0004g02490.t01	Wine grape	plasma membrane	18.97	11.1
VIT_08s0040g01620.t01	Wine grape	cytosol	18.51	10.69
VIT_13s0019g04600.t01	Wine grape	plasma membrane	18.51	10.62

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	ProteinID:CCB50171	ProteinID:CCB50171.1
UniProt:F6HD76	EMBL:FN595556	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PANTHER:PTHR19241
PANTHER:PTHR19241:SF229	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000210A706	ArrayExpress:VIT_00s0625g00050	EnsemblPlantsGene:VIT_00s0625g00050
EnsemblPlants:VIT_00s0625g00050.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:33168714..33174609

Molecular Weight (calculated)

71437.2 Da

IEP (calculated)

7.744

GRAVY (calculated)

0.121

Length

643 amino acids

Sequence
(BLAST)

001: AYVTQDDTLM TTLTVREAVH YSAQLQLPGS MPTSAKKERA EMTICEMGLQ DCIETRIGGW GKKGLSGGQK RRVSICIEIL TRPKLLFLDE PTSGLDSAAS
101: YHVMDRIVKL AHREGITVIA SIHQPSSEVF ELFHNLCLLS SGKTVYFGPA SMANEFFAKN GFPCPSLRNP SDHYLRTINK DFDLDIEEGL GGATSTEEAI
201: NILVRAYKSS ETCQQVQGRV SEICQQKGVL EKKGSQASFA TQCLVLTKRS FVNMYRDLGY YWLRLAIYIA LCLCVGTIFY DIGFSYGSIQ ARGSMLMFVA
301: AFLTFMAIGG FPSFVEDMKI FGRERLNGHY GVGAFVIGNS LSSIPYLLMI SLIPGAIAYY LVHLQKGFEH FVYFAILLFV CMMLVESLMM MVASIVPDFL
401: MGIITGAGIQ GVMMLCGGFF RLPNDLPNPF WKYPMYYIAF HKYANQGFYK NEFEGLTFPN NQVGGAPTIT VGSLSLSMLV LVDDVRCHTS IRKAQLIDSP
501: ALYLSCFETL IRSSMDSQIH MPRWTPRSPS TDTMKNDRVD VPRWTLIPSP SASPEKVDGN SKMGSIVKLR DYNKGYNLEE IFQLTTSLCW VQLSKVGLSW
601: KPLPGLTGYA QPGEVLGPSG CGKSTILDAL AGKYLYIELF FLN

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.