Factsheet for Solyc11g009100.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	93.22	93.8
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	57.78	70.75
VIT_07s0191g00010.t01	Wine grape	peroxisome, plasma membrane, vacuole	68.1	70.27
GSMUA_AchrUn_...	Banana	plasma membrane	59.48	64.98
Solyc01g105400.2.1	Tomato	cytosol, plastid	11.56	64.1
GSMUA_Achr6P04180_001	Banana	plasma membrane	57.32	62.94
VIT_00s0625g00020.t01	Wine grape	plastid	69.95	61.27
GSMUA_Achr10P...	Banana	plasma membrane	39.14	60.77
Os10t0163290-00	Rice	cytosol, endoplasmic reticulum, extracellular	23.42	59.84
GSMUA_AchrUn_...	Banana	plasma membrane	53.77	59.56
Solyc01g105450.2.1	Tomato	plasma membrane	57.01	59.01
Os09t0472100-01	Rice	plasma membrane	62.56	56.31
TraesCS7B01G490800.1	Wheat	peroxisome	50.54	56.07
TraesCS2B01G128800.1	Wheat	plasma membrane	40.83	55.67
Os09t0472200-00	Rice	plasma membrane	61.17	55.45
VIT_00s0625g00050.t01	Wine grape	cytosol	54.85	55.37
TraesCS5B01G248000.1	Wheat	plasma membrane, plastid	62.1	55.21
TraesCS5A01G249900.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	62.25	55.12
TraesCS5B01G247800.1	Wheat	plasma membrane, plastid	62.25	55.12
TraesCS5D01G257000.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	62.25	55.12
TraesCS5B01G247700.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	62.1	54.98
TraesCS5D01G257400.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	62.1	54.98
TraesCS5D01G257100.2	Wheat	nucleus, peroxisome, plasma membrane, plastid	61.94	54.55
HORVU5Hr1G070400.3	Barley	cytosol, peroxisome	63.02	54.17
Os12t0409700-00	Rice	cytosol, peroxisome, plasma membrane	35.44	54.12
OQU84078	Sorghum	cytosol, plasma membrane	47.92	54.09
KXG35822	Sorghum	mitochondrion, nucleus, peroxisome, plasma membrane	60.86	53.81
HORVU2Hr1G019010.2	Barley	plasma membrane	34.67	53.7
TraesCS7B01G490700.1	Wheat	plastid	35.59	52.86
Zm00001d020811_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	59.94	52.85
TraesCS2B01G128400.1	Wheat	plastid	53.77	51.63
TraesCS2A01G110200.1	Wheat	plastid	53.31	51.56
TraesCS2D01G110700.1	Wheat	plastid	52.7	50.97
TraesCSU01G100600.1	Wheat	plastid	54.08	50.65
VIT_00s0989g00010.t01	Wine grape	plastid	69.18	50.39
TraesCSU01G100800.1	Wheat	plastid	53.77	50.36
TraesCS7A01G566200.1	Wheat	plasma membrane, plastid	53.31	50.07
TraesCS2D01G110800.1	Wheat	plastid	52.23	50.0
TraesCS6A01G140300.2	Wheat	plastid	54.55	49.93
Os09t0250800-00	Rice	mitochondrion	56.55	49.59
HORVU6Hr1G027440.10	Barley	plastid	52.54	49.21
KXG19944	Sorghum	plastid	55.16	49.18
TraesCS6D01G128600.1	Wheat	plastid	53.77	49.15
TraesCS6B01G168800.2	Wheat	plastid	53.62	48.95
KXG34927	Sorghum	plastid	52.7	48.93
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	49.15	48.33
TraesCS4A01G308200.1	Wheat	plastid	51.93	48.21
Zm00001d019398_P001	Maize	plastid	51.46	48.2
Os07t0288700-02	Rice	plastid	53.77	47.87
Os12t0411700-01	Rice	plastid	52.54	47.83
Solyc03g019760.2.1	Tomato	nucleus	51.16	46.76
Zm00001d048621_P001	Maize	plastid	51.46	46.39
Os09t0125900-01	Rice	plastid	37.44	46.29
HORVU2Hr1G018920.1	Barley	cytosol	36.36	46.18
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	49.46	44.9
TraesCS2B01G128700.1	Wheat	plastid	42.53	44.37
Solyc11g065350.1.1	Tomato	cytosol, peroxisome, plasma membrane	44.84	42.67
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	43.14	40.7
Solyc06g074970.1.1	Tomato	plastid	30.82	33.22
Solyc11g069710.1.1	Tomato	plastid	35.9	32.23
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	11.25	28.63
Solyc04g025170.2.1	Tomato	mitochondrion	22.8	14.51
Solyc06g075020.2.1	Tomato	plasma membrane	24.35	14.44
Solyc11g069820.1.1	Tomato	plasma membrane	23.73	14.09
Solyc09g008000.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	23.11	13.75

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	UniProt:K4D5H0	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF229	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc11g009100.1
EnsemblPlants:Solyc11g009100.1.1	TMHMM:TMhelix	UniParc:UPI00027694D8	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:+:3211903..3218285

Molecular Weight (calculated)

73057.5 Da

IEP (calculated)

8.770

GRAVY (calculated)

0.096

Length

649 amino acids

Sequence
(BLAST)

001: MDSPNDEIQK TMSKKKESDP LIMATKINIS SNNDNNDGIY LCWKDLWVSV PNKKVGRRPI LEGISGYAQP GEVLAIMGPS GCGKSTLLDA LAGRLASNTR
101: QSGDILVNGR KQALAFGTSA YVTQDDTLMT TLTVKETIYY SAQLQLPQSM SLETKKERAE ETIKEMGLQE AMNTRIGGWS LKGLSGGQKR RVSICIEILT
201: RPKLLFLDEP TSGLDSAASY HVMNRIIKIA QQDMRTIVAS IHQPSSEVFE LFGNLCLLSY GKTIYFGSTS KANEFFAVSG FPCPFMRNPS DHYLRTINKD
301: FDDIEEGLGK NIINSGKAID TLVMSYESSE ACLNVRQRVL TISQKNGRFI ENKGSQAGFI TQCRVLTQRS FVNMYRDLGY YWLRLLIYLA LCLCIGTIFH
401: EIGSDYGSIQ ARSSMLVFVV GFLTFMAIGG FPSFVEEMKF FTRERLNGHY GVGAFVIGNT LSSTPFLLLI SLVPGAVAYY LADVQKGIDK FAYFFLMLFV
501: CMMLVESLMM IVASIVPDFL MGIITGAGIQ GIMMLNGGFF RLPNELPMPI WKYPLYYLSF HKYAIQGFYK NEFETFTYFT NSGLAIRVTR DEILRDIFQV
601: ELNYSKWGNI VIVFGMVILY RLIFLCIIKG KEKFRPMVRG FKYCYVPHI

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.