Factsheet for Solyc06g072090.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, plastid

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069344	Potato	plasma membrane	41.06	96.1
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	88.79	81.96
Solyc03g019760.2.1	Tomato	nucleus	80.3	74.65
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	73.79	70.27
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	69.55	68.82
TraesCS1B01G181300.2	Wheat	cytosol, peroxisome, plasma membrane	72.12	66.48
TraesCS1D01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	71.97	66.34
Os04t0528300-01	Rice	plasma membrane	70.76	65.68
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	71.67	65.6
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	70.45	65.13
Os10t0494300-01	Rice	extracellular, plasma membrane	70.91	64.73
Zm00001d013960_P001	Maize	cytosol, peroxisome, plasma membrane	69.55	64.65
TraesCSU01G020100.1	Wheat	plasma membrane	69.85	64.39
TraesCS2A01G374100.1	Wheat	plasma membrane	69.7	64.07
TraesCS1A01G164500.1	Wheat	cytosol	64.85	62.39
Zm00001d032601_P002	Maize	cytosol, peroxisome, plasma membrane	67.73	60.73
HORVU2Hr1G090960.2	Barley	cytosol	69.39	60.58
OQU82009	Sorghum	mitochondrion	71.21	60.26
TraesCS2D01G370400.2	Wheat	plastid	69.55	59.15
Solyc01g105400.2.1	Tomato	cytosol, plastid	10.15	57.27
TraesCS1D01G150800.1	Wheat	cytosol, peroxisome, plasma membrane	60.76	55.69
Solyc11g065350.1.1	Tomato	cytosol, peroxisome, plasma membrane	54.85	53.08
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	41.06	51.13
Solyc01g105450.2.1	Tomato	plasma membrane	46.97	49.44
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	48.33	49.15
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	48.94	46.95
Solyc06g074970.1.1	Tomato	plastid	29.7	32.56
Solyc11g069710.1.1	Tomato	plastid	35.3	32.23
Solyc04g025170.2.1	Tomato	mitochondrion	23.64	15.29
Solyc06g075020.2.1	Tomato	plasma membrane	24.09	14.53
Solyc09g008000.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	23.94	14.48
Solyc11g069820.1.1	Tomato	plasma membrane	23.79	14.36

Protein Annotations

MapMan:21.9.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0015245	GO:GO:0015908	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	UniProt:K4C8T1	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF271	SMART:SM00382
SUPFAM:SSF52540	EnsemblPlantsGene:Solyc06g072090.1	EnsemblPlants:Solyc06g072090.1.1	TMHMM:TMhelix	UniParc:UPI0002765585	SEG:seg

Description

No Description!

Coordinates

chr6:-:44429021..44432330

Molecular Weight (calculated)

73882.5 Da

IEP (calculated)

8.749

GRAVY (calculated)

0.142

Length

660 amino acids

Sequence
(BLAST)

001: MMRNSLSSSS FSSSSAIMEI EEESEPQNAN GIVVSAHVAW KDVNVMVTLN NGDTRNVLEG LTGYAEPGTF TALMGPSGAG KSTLLDALSG RLGSNAILTG
101: KILLNGRKAK LSFGTAAYVT QDDTLIGTLT VRETIYYSAQ LRLPDRMPLS KKRTLVESTI TQMGLQDCAD TFIGNWHLRG ISGGEKRRVS IALAILMRPR
201: LLFLDEPTSG LDSASAFFVT QALHCLSRDG RTVIASIHQP SSEVFELFDR LYLLSGGKTV YFGQASEANQ FFAEAGFPCP SFRSPSDHFL RCSNSDFDKV
301: KATLRELIKY NDDPLNKMTT AEVIRSLVDF YRHSQYCYVA NETVEEMSKV KGTVLDSNGS HASFFMQSYS LTKRSFVNMS RDFGYYWLRI VIYLVVSVCL
401: GTIYFNVGTK YNSIQARAAC SSFVFGFMTF MSIGGFPSFV EDMKVFQRER MNGHYGVIVF VISNTLSAMP FLILIAILSG TVCYFMVHFH PGFSHYFFFV
501: LAIYASITAV ESLMMVIASV VPNFLMGIII GAGILGISML VSGFFRLPYD IPKPVWRYPV SYLTFDFWAV QGQYKNDLKG LIFDNHSPHP PKITGEYALK
601: QIFQIDVNRS KWVDLSAIFS LIIIYRVIFF FMIKINEDVT PWLRGYIARR KMQHSGPNQH

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.