Factsheet for TraesCSU01G020100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G374100.1	Wheat	plasma membrane	99.58	99.3
Os04t0528300-01	Rice	plasma membrane	92.74	93.39
TraesCS2D01G370400.2	Wheat	plastid	99.3	91.62
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	91.2	90.57
HORVU2Hr1G090960.2	Barley	cytosol	95.53	90.48
OQU82009	Sorghum	mitochondrion	91.76	84.23
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	75.84	78.36
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	72.49	77.81
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	75.7	76.88
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	75.0	76.06
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	74.86	75.81
Solyc03g019760.2.1	Tomato	nucleus	74.44	75.07
PGSC0003DMT400039496	Potato	cytosol, peroxisome, plasma membrane	73.74	74.68
AT1G17840.1	Thale cress	cytosol, peroxisome, plasma membrane	73.18	74.54
CDY19179	Canola	cytosol, peroxisome, plasma membrane	70.11	74.26
CDY26211	Canola	cytosol, peroxisome, plasma membrane	69.83	73.96
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.55	73.67
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	72.07	73.61
CDX83888	Canola	cytosol, peroxisome, plasma membrane	69.69	73.49
CDX96749	Canola	cytosol, peroxisome, plasma membrane	69.41	73.41
PGSC0003DMT400069344	Potato	plasma membrane	28.35	71.99
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	64.39	69.85
PGSC0003DMT400069337	Potato	cytosol, peroxisome, plastid	61.17	66.77
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	65.36	65.45
TraesCSU01G100600.1	Wheat	plastid	41.76	43.15
TraesCSU01G100800.1	Wheat	plastid	41.62	43.0
TraesCSU01G106900.1	Wheat	plasma membrane	22.91	15.46

Protein Annotations

MapMan:21.9.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0009611	GO:GO:0009628	GO:GO:0009651
GO:GO:0009653	GO:GO:0009719	GO:GO:0009737	GO:GO:0009790	GO:GO:0009791	GO:GO:0009897
GO:GO:0010222	GO:GO:0010588	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0042803
GO:GO:0080051	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF271	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
EnsemblPlantsGene:TraesCSU01G020100	EnsemblPlants:TraesCSU01G020100.1	TIGR:cd03213	SEG:seg	:	:

Description

No Description!

Coordinates

chrUn:-:22053642..22058184

Molecular Weight (calculated)

78947.4 Da

IEP (calculated)

9.130

GRAVY (calculated)

0.192

Length

716 amino acids

Sequence
(BLAST)

001: MRGGGGGGED TRRTAAGQAM VELQANGATA TSASGAMVVG LSPLSETLWR DSKAMPGAGA AVLIGEVSAR LTWKDLSVTV ALGPGKTQTV LDELTGFAEP
101: GSLTALMGPS GSGKSTLLDA LAGRLAANAF LSGSVLLNGR KAKLSFGAAA YVTQDDNLIG TLTVRETIGY SALLRLPDKM PRDDKRALVE GTIVEMGLQD
201: CADTVIGNWH LRGVSGGEKR RVSIALELLM RPRLLFLDEP TSGLDSSSAF FVTQTLRGLA RDGRTVIASI HQPSSEVFEL FDMLFLLSGG KNVYFGQAAQ
301: ACEFFAEVGF PCPPLRNPSD HFLRCVNSDF DKVKATLKGS MKARIERSDD PLDKITTSEA IRKLVSAYNR SQYYYAAREK VNDIARIKGT VMDSRGSQAS
401: FLMQACTLTR RSFINMSRDF GYYWLRLLIY LLVTVCIGTI YLDVGTKYTS ILARAACAAF VFGFVTFMSI GGFPSFVEEM KVFQRERLNG HYGVAAFVIA
501: NTISALPFLV LICFMSGTVC YFMVRLHPGF THYIFFVLNL YASVTVVESL MMAIASVIPN FLMGIIIGAG IQGIFMLVSG YFRLPYDIPK VFWRYPMQYI
601: SFHYWALQGQ CQNDMDGLLF DNQYPDQPKI PGEFILKYIF QINVHRSKWI DLSVIFSMIF IYRLLFFIMI KVNEDVMPWI RGYIARKRLQ KKVPAIGKTP
701: SLRGYVVDPE LGPNEG

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.